RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 DCAKDQ8WVC6 231 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 C1orf54Q8WWF1 131 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 IPCEF1Q8WWN9 437 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 HERVK_113Q902F9 699 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 FCGR1BQ92637 280 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 RPL3LQ92901 407 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC35C1Q96A29 364 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TMIGD2Q96BF3 282 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 INTS12Q96CB8 462 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 AP2M1Q96CW1 435 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TUBGCP3Q96CW5 907 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 ZDHHC12Q96GR4 267 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 APIPQ96GX9 242 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 CENPNQ96H22 339 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DEFB118Q96PH6 123 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SLC29A1Q99808 456 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 PKP2Q99959 881 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 KCTD14Q9BQ13 255 aaPredicted RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM245Q9H330 911 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 COQ10BQ9H8M1 238 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 CAB39LQ9H9S4 337 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 WDR41Q9HAD4 459 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TMEM8AQ9HCN3 771 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TUFT1Q9NNX1 390 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SPAG4Q9NPE6 437 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 TIGARQ9NQ88 270 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 BLOC1S4Q9NUP1 217 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 ACOXLQ9NUZ1 547 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 INTS10Q9NVR2 710 aaKnown RBP4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SMOXQ9NWM0 555 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 MAT2BQ9NZL9 334 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 DUX4Q9UBX2 424 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 PHF11Q9UIL8 331 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 PCDHGB1Q9Y5G3 927 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 SNX13Q9Y5W8 968 aa4.41□□□□□ -1.7
PDLIM5-211ENST00000508531 CACNA1GO43497 2377 aa4.4□□□□□ -1.7
PDLIM5-211ENST00000508531 ZSWIM8A7E2V4 1837 aa4.4□□□□□ -1.7
PDLIM5-211ENST00000508531 A0A1W2PPM1 405 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 TCRBV3S1A0A5B6 114 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 DENND3A2RUS2 1198 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 LINC00862A6NCI5 91 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 BBIP1A8MTZ0 92 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF814B7Z6K7 855 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ATP6V1G2-DDX39BF2Z307 99 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 hCG_2039718K7EN88 272 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 TOR1AO14656 332 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 LIASO43766 372 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 TSC22D2O75157 780 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PEX14O75381 377 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PSIP1O75475 530 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 UGT2B17O75795 530 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 FGF18O76093 207 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PROSCO94903 275 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 CDK14O94921 469 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 CALB1P05937 261 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 FOSL2P15408 326 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF3P17036 446 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 CHRNB2P17787 502 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 GLRA2P23416 452 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PSMA3P25788 255 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 HNF4AP41235 474 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 HTR2BP41595 481 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 TECP42680 631 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 HTR3AP46098 478 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 HAAOP46952 286 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC1A6P48664 564 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 HCAR3P49019 387 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 CENPAP49450 140 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 MAPK12P53778 367 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 UGT2B15P54855 530 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 MYL6P60660 151 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 CSNK2BP67870 215 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 UBXN2AP68543 259 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PRAMEP78395 509 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 RHAGQ02094 409 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 GBE1Q04446 702 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 GRAPQ13588 217 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PUM3Q15397 648 aaKnown RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 NRF1Q16656 503 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 UGP2Q16851 508 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 RFX4Q33E94 735 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 SPANXN2Q5MJ10 180 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ATAD3CQ5T2N8 411 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM102BQ5T8I3 360 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM109BQ6ICB4 259 aaPredicted RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 SULT1C3Q6IMI6 304 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ARSKQ6UWY0 536 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 MACC1Q6ZN28 852 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF704Q6ZNC4 412 aaPredicted RBP4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PLEKHM3Q6ZWE6 761 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 COPS6Q7L5N1 327 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 DHFR2Q86XF0 187 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 PLD3Q8IV08 490 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 BBS7Q8IWZ6 715 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 CDH26Q8IXH8 852 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 DSELQ8IZU8 1212 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 CLIP4Q8N3C7 705 aa4.4□□□□□ -1.71
PDLIM5-211ENST00000508531 AADATQ8N5Z0 425 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms