RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 OTUB1Q96FW1 271 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 PDLIM5Q96HC4 596 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 RPP25Q9BUL9 199 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 EGLN3Q9H6Z9 239 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 GSN-AS1Q9NRJ2 163 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 LNPEPQ9UIQ6 1025 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 ELF5Q9UKW6 265 aaPredicted RBP4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 PA2G4Q9UQ80 394 aaKnown RBP4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 SELENOKQ9Y6D0 94 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 VCANP13611 3396 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 HCFC1P51610 2035 aa4.19□□□□□ -1.74
TOPBP1-206ENST00000508524 BRCA1P38398 1863 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 TRIOBPQ9H2D6 2365 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 IGHV4-30-2A0A087WSY4 118 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 TRAV24A0A0B4J272 114 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 TRBC2A0A5B9 178 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 SNX3O60493 162 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 CELF2O95319 508 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 STARD3NLO95772 234 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 AZGP1P25311 298 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 ETV5P41161 510 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 LIMK1P53667 647 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 DCDC1P59894 354 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 RALGDSQ12967 914 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 CHMP1BQ7LBR1 199 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 IQCHQ86VS3 1027 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 FAM131BQ86XD5 332 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 GPC2Q8N158 579 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 TTC30BQ8N4P2 665 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 POGLUT1Q8NBL1 392 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 SLC4A11Q8NBS3 891 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 METTL21AQ8WXB1 218 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 PROX1Q92786 737 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 LRRC3BQ96PB8 259 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 KLHL5Q96PQ7 755 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 CDCA3Q99618 268 aaPredicted RBP4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 ZNF577Q9BSK1 485 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 PUS3Q9BZE2 481 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 CEP290O15078 2479 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 VIRMAQ69YN4 1812 aaKnown RBP4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 KIF13BQ9NQT8 1826 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 LTBP1Q14766 1721 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 DOT1LQ8TEK3 1739 aa4.18□□□□□ -1.74
TOPBP1-206ENST00000508524 CROCCQ5TZA2 2017 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 PLEKHG2Q9H7P9 1386 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 NFAT5O94916 1531 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 C5P01031 1676 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 MTMR11A4FU01 709 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 AP5Z1O43299 807 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 TLX2O43763 284 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 TADA2AO75478 443 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 GSRP00390 522 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 HOXD4P09016 255 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 FOLR2P14207 255 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 MYOGP15173 224 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 MC5RP33032 325 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 CSE1LP55060 971 aaKnown RBP4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 ACSM1Q08AH1 577 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 ZNF177Q13360 481 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 PEX6Q13608 980 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 BECN1Q14457 450 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 OPCMLQ14982 345 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 SLC24A5Q71RS6 500 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 PLPPR4Q7Z2D5 763 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 HPS6Q86YV9 775 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 RCOR2Q8IZ40 523 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 RYBPQ8N488 228 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 LRTM2Q8N967 370 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 NPRL2Q8WTW4 380 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 PI4K2AQ9BTU6 479 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 DNAI2Q9GZS0 605 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 TUBB1Q9H4B7 451 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 KDM6AO15550 1401 aaPredicted RBP4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 ITSN1Q15811 1721 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 LAMA3Q16787 3333 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 KAT6BQ8WYB5 2073 aa4.17□□□□□ -1.74
TOPBP1-206ENST00000508524 SPTBN5Q9NRC6 3674 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 CENPFP49454 3210 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 SBF1O95248 1867 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 UBR3Q6ZT12 1888 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 SURF4O15260 269 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 RPS6KA5O75582 802 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 SLCO2B1O94956 709 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 NXPH4O95158 308 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 CAPGP40121 348 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 CASP2P42575 452 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 CLCN4P51793 760 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 UBASH3AP57075 661 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 DHODHQ02127 395 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 ZFP36L1Q07352 338 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 NONOQ15233 471 aaKnown RBP eCLIP4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 C9orf152Q5JTZ5 239 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 WDR78Q5VTH9 848 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 OR4C11Q6IEV9 310 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 CTR9Q6PD62 1173 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 PRPF39Q86UA1 669 aaKnown RBP4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 POMGNT2Q8NAT1 580 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 ROBO4Q8WZ75 1007 aa4.16□□□□□ -1.74
TOPBP1-206ENST00000508524 SECISBP2LQ93073 1101 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms