RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 A0A1W2PQL4 384 aaPredicted RBP16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 OR5K3A6NET4 321 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 ZAR1LA6NP61 321 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 YY2O15391 372 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 HMBSP08397 361 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 ZNF7P17097 686 aaPredicted RBP16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 TNFRSF1BP20333 461 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 CSTF2P33240 577 aaKnown RBP eCLIP16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 SPHARQ15513 63 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 PTCHD4Q6ZW05 846 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 DDX53Q86TM3 631 aaKnown RBP16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 UBE2J2Q8N2K1 259 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 CSGALNACT1Q8TDX6 532 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 DIRAS2Q96HU8 199 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 FCRL1Q96LA6 429 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 MAPKAP1Q9BPZ7 522 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 BOCQ9BWV1 1114 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 HDHD5Q9BXW7 423 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 FZD3Q9NPG1 666 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 FTSJ1Q9UET6 329 aa16.44■□□□□ 0.22
SQSTM1-211ENST00000506690 PROM1O43490 865 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 PRMT3O60678 531 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 SLC25A14O95258 325 aaPredicted RBP16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 IFI30P13284 250 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 ARHGEF7Q14155 803 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 TOR2AQ5JU69 321 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 TMC8Q8IU68 726 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 CFAP52Q8N1V2 620 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 CLDN22Q8N7P3 220 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 BRI3BPQ8WY22 251 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 B3GALT6Q96L58 329 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 FBXO44Q9H4M3 255 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 SLC32A1Q9H598 525 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 PLEKHB1Q9UF11 243 aaPredicted RBP16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 CLEC2DQ9UHP7 191 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 TPST2O60704 377 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 IL1AP01583 271 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 HLA-DQB1P01920 261 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 PSKH1P11801 424 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 CKMT1AP12532 417 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 GPR15P49685 360 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 HSPA14Q0VDF9 509 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 GPRC6AQ5T6X5 926 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 DUSP18Q8NEJ0 188 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 EID2BQ96D98 161 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 EBPLQ9BY08 206 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 ARHGAP39Q9C0H5 1083 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 ING3Q9NXR8 418 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 ABI2Q9NYB9 513 aaPredicted RBP16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 MARCH2Q9P0N8 246 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 EIF3KQ9UBQ5 218 aaKnown RBP16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 NUP50Q9UKX7 468 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 HSPB11Q9Y547 144 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 PRSS21Q9Y6M0 314 aa16.43■□□□□ 0.22
SQSTM1-211ENST00000506690 C1orf226A1L170 272 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 PRAMEF25A6NGN4 478 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 CDRT1O95170 752 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 TSPAN19P0C672 248 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 MSL3P1P0C860 447 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 POU2F1P14859 743 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 TACR2P21452 398 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 PSEN2P49810 448 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 MXD1Q05195 221 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 RGNQ15493 299 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 TEAD4Q15561 434 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 PYDC2Q56P42 97 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 LCN1P1Q5VSP4 162 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 SERPINA9Q86WD7 417 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 SYT12Q8IV01 421 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 LAS2Q8IYD9 372 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 FBXL6Q8N531 539 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 ZBTB2Q8N680 514 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 OR4M2Q8NGB6 313 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 THSD1Q9NS62 852 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 SLC23A1Q9UHI7 598 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 ENOPH1Q9UHY7 261 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 SSR3Q9UNL2 185 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 ST3GAL5Q9UNP4 418 aa16.42■□□□□ 0.22
SQSTM1-211ENST00000506690 WWP2O00308 870 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 POMCP01189 267 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 FAM157BP0CG42 384 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 COX7A2P14406 83 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 CNR2P34972 360 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 MAP2K3P46734 347 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 OR1E2P47887 323 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 LIMS1P48059 325 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 ZXDBP98169 803 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 IFI44LQ53G44 452 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 HSDL2Q6YN16 418 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 CLDN19Q8N6F1 224 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 C1orf52Q8N6N3 182 aaKnown RBP16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 GTPBP3Q969Y2 492 aaKnown RBP16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 FAM129BQ96TA1 746 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 RBFOX1Q9NWB1 397 aaKnown RBP16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 HCN4Q9Y3Q4 1203 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 PCDH17O14917 1159 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 KDELR3O43731 214 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 ENTPD6O75354 484 aa16.41■□□□□ 0.22
SQSTM1-211ENST00000506690 HBQ1P09105 142 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms