RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ART1P52961 327 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 RAB8AP61006 207 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 ZNF33BQ06732 778 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 ABRAXAS2Q15018 415 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 SFT2D3Q587I9 215 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 ZNF468Q5VIY5 522 aaPredicted RBP12.34□□□□□ -0.43
DDX41-204ENST00000504807 PAPD4Q6PIY7 484 aaKnown RBP12.34□□□□□ -0.43
DDX41-204ENST00000504807 NXPE4Q6UWF7 544 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 TMPRSS11BQ86T26 416 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 CRLF3Q8IUI8 442 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 PALM2Q8IXS6 379 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDX41-204ENST00000504807 TMEM52Q8NDY8 209 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 ESAMQ96AP7 390 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 HIST1H2AHQ96KK5 128 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 MAGEB10Q96LZ2 347 aaPredicted RBP12.34□□□□□ -0.43
DDX41-204ENST00000504807 HIST1H2AJQ99878 128 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 H2AFJQ9BTM1 129 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 NECTIN3Q9NQS3 549 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 OLAHQ9NV23 265 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 ZFP69BQ9UJL9 534 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 OARD1Q9Y530 152 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 CLDN16Q9Y5I7 305 aa12.34□□□□□ -0.43
DDX41-204ENST00000504807 NBEAL1Q6ZS30 2694 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 A0A0G2JN53 185 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 OR5H15A6NDH6 313 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 A8MUI8 341 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 CCDC188H7C350 402 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 B4GALT2O60909 372 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 ENO2P09104 434 aaPredicted RBP12.33□□□□□ -0.44
DDX41-204ENST00000504807 SLC35G6P0C7Q6 338 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 ALOX12P18054 663 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 EPORP19235 508 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 MAOAP21397 527 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 HNRNPH1P31943 449 aaKnown RBP12.33□□□□□ -0.44
DDX41-204ENST00000504807 HNRNPFP52597 415 aaKnown RBP12.33□□□□□ -0.44
DDX41-204ENST00000504807 DLG1Q12959 904 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 TUBA3CQ13748 450 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 USP10Q14694 798 aaKnown RBP12.33□□□□□ -0.44
DDX41-204ENST00000504807 OR4D1Q15615 310 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 ACER2Q5QJU3 275 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 TUBA3EQ6PEY2 450 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 FAM180AQ6UWF9 173 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 SLCO4C1Q6ZQN7 724 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 MRGPRGQ86SM5 289 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 ZNF227Q86WZ6 799 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 KLHDC8AQ8IYD2 350 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 MDS2Q8NDY4 140 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 PLPP5Q8NEB5 264 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 NR4A3Q92570 626 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 RHBDF1Q96CC6 855 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 RNF32Q9H0A6 362 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 RHOJQ9H4E5 214 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 STMN3Q9NZ72 180 aa12.33□□□□□ -0.44
DDX41-204ENST00000504807 IGKV3D-11A0A0A0MRZ8 115 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 TRAV17A0A0B4J275 112 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 TCRBV9S1A1TA0A576 114 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 DYTNA2CJ06 578 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 NCF1BA6NI72 391 aaPredicted RBP12.32□□□□□ -0.44
DDX41-204ENST00000504807 NCF1CA8MVU1 366 aaPredicted RBP12.32□□□□□ -0.44
DDX41-204ENST00000504807 MAGEB17A8MXT2 336 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 FHP07954 510 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 NCF1P14598 390 aaPredicted RBP12.32□□□□□ -0.44
DDX41-204ENST00000504807 CD22P20273 847 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 PPP2R1BP30154 601 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 CD96P40200 585 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 SLC26A5P58743 744 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 CDKL1Q00532 357 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 PWP1Q13610 501 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 RUNX2Q13950 521 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 CSHL1Q14406 222 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 EFTUD2Q15029 972 aaKnown RBP eCLIP12.32□□□□□ -0.44
DDX41-204ENST00000504807 NSDHLQ15738 373 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 TOR1AIP1Q5JTV8 583 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 SPINK14Q6IE38 97 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 ZDHHC24Q6UX98 284 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 CA13Q8N1Q1 262 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 BCORP1Q8N888 145 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 NFAM1Q8NET5 270 aaPredicted RBP12.32□□□□□ -0.44
DDX41-204ENST00000504807 SPATA4Q8NEY3 305 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 METTL21AQ8WXB1 218 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 TBC1D20Q96BZ9 403 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 VPS50Q96JG6 964 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 ERP44Q9BS26 406 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.32□□□□□ -0.44
DDX41-204ENST00000504807 GSX1Q9H4S2 264 aaPredicted RBP12.32□□□□□ -0.44
DDX41-204ENST00000504807 PELI2Q9HAT8 420 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 SAYSD1Q9NPB0 183 aa12.32□□□□□ -0.44
DDX41-204ENST00000504807 CNTRLQ7Z7A1 2325 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 FAM159BA6NKW6 160 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 PRAMEF2O60811 474 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 WDR47O94967 919 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 GRK3P35626 688 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 AHRP35869 848 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 TLE4Q04727 773 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 SLBPQ14493 270 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDX41-204ENST00000504807 HERC3Q15034 1050 aa12.31□□□□□ -0.44
DDX41-204ENST00000504807 RBBP5Q15291 538 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms