RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 OR7A2PQ8NGA2 310 aa11.13□□□□□ -0.63
USP46-204ENST00000503060 FGF14Q92915 247 aa11.13□□□□□ -0.63
USP46-204ENST00000503060 REPS1Q96D71 796 aa11.13□□□□□ -0.63
USP46-204ENST00000503060 FAM120BQ96EK7 910 aaKnown RBP11.13□□□□□ -0.63
USP46-204ENST00000503060 PRPF18Q99633 342 aaKnown RBP11.13□□□□□ -0.63
USP46-204ENST00000503060 REXO4Q9GZR2 422 aaKnown RBP11.13□□□□□ -0.63
USP46-204ENST00000503060 ZNF696Q9H7X3 374 aa11.13□□□□□ -0.63
USP46-204ENST00000503060 RNF103-CHMP3A0A140T963 221 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.12□□□□□ -0.63
USP46-204ENST00000503060 LOC105371267A0A1B0GV96 52 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.12□□□□□ -0.63
USP46-204ENST00000503060 RFXANKO14593 260 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 SH3BGRLO75368 114 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 RASAL1O95294 804 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 C1GALT1C1LP0DN25 315 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 RAP2AP10114 183 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 LAMP2P13473 410 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 GZMMP51124 257 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 WNT3P56703 355 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 RPS13P62277 151 aaKnown RBP11.12□□□□□ -0.63
USP46-204ENST00000503060 CHRNB3Q05901 458 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 RPA4Q13156 261 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 SLBPQ14493 270 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP46-204ENST00000503060 SF1Q15637 639 aaKnown RBP11.12□□□□□ -0.63
USP46-204ENST00000503060 RAB30Q15771 203 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 DUOXA1Q1HG43 343 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 FAM98BQ52LJ0 330 aaKnown RBP11.12□□□□□ -0.63
USP46-204ENST00000503060 C2orf27AQ580R0 203 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 ZNF704Q6ZNC4 412 aaPredicted RBP11.12□□□□□ -0.63
USP46-204ENST00000503060 PDZD3Q86UT5 571 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 LRRTM4Q86VH4 590 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 AMZ2Q86W34 360 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 HDDC3Q8N4P3 179 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 OR52E4Q8NGH9 312 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 CHTF18Q8WVB6 975 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 ZNF845Q96IR2 970 aaPredicted RBP11.12□□□□□ -0.63
USP46-204ENST00000503060 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 RPP25Q9BUL9 199 aaKnown RBP11.12□□□□□ -0.63
USP46-204ENST00000503060 EFCAB11Q9BUY7 163 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 UGT2B28Q9BY64 529 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 SLC28A3Q9HAS3 691 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 SLC23A2Q9UGH3 650 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 CROCCQ5TZA2 2017 aa11.12□□□□□ -0.63
USP46-204ENST00000503060 DLGAP1O14490 977 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 ST8SIA5O15466 376 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 SCN2BO60939 215 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 ADH1BP00325 375 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 COX7A2P14406 83 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 C5AR1P21730 350 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 TRIM23P36406 574 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 SOX9P48436 509 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 ABHD18Q0P651 414 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 PYCR3Q53H96 274 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 SPIN4Q56A73 249 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 PAGE2BQ5JRK9 111 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 IYDQ6PHW0 289 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 ISLR2Q6UXK2 745 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 LAS2Q8IYD9 372 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 C10orf111Q8N326 155 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 OR8J2Q8NGG1 315 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 SLC5A11Q8WWX8 675 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 STARD8Q92502 1023 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 TFAP2CQ92754 450 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 FAM162AQ96A26 154 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 TRMT61BQ9BVS5 477 aaKnown RBP11.11□□□□□ -0.63
USP46-204ENST00000503060 LGR4Q9BXB1 951 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 CARS2Q9HA77 564 aaKnown RBP11.11□□□□□ -0.63
USP46-204ENST00000503060 CCDC177Q9NQR7 707 aaPredicted RBP11.11□□□□□ -0.63
USP46-204ENST00000503060 EHD3Q9NZN3 535 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 SERGEFQ9UGK8 458 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 ASF1AQ9Y294 204 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 CHURC1-FNTBB4DL54 471 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 M0R3H8 397 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 FPGTO14772 594 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 CLOCKO15516 846 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 ANXA4P09525 319 aaPredicted RBP11.11□□□□□ -0.63
USP46-204ENST00000503060 GPR85P60893 370 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 AGERQ15109 404 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 BCL2A1Q16548 175 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 NXPE4Q6UWF7 544 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 STK32CQ86UX6 486 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 OXR1Q8N573 874 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 RAD51AP1Q96B01 352 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 ABHD8Q96I13 439 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 IL17FQ96PD4 163 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 BDH2Q9BUT1 245 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 ANKRD60Q9BZ19 345 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 MBNL1Q9NR56 388 aaKnown RBP11.11□□□□□ -0.63
USP46-204ENST00000503060 FAM120CQ9NX05 1096 aaKnown RBP11.11□□□□□ -0.63
USP46-204ENST00000503060 ZNF639Q9UID6 485 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 BAG5Q9UL15 447 aa11.11□□□□□ -0.63
USP46-204ENST00000503060 A0A1W2PP55 124 aa11.1□□□□□ -0.63
USP46-204ENST00000503060 PIPSLA2A3N6 862 aa11.1□□□□□ -0.63
USP46-204ENST00000503060 EI24O14681 340 aa11.1□□□□□ -0.63
USP46-204ENST00000503060 SCAMP2O15127 329 aaKnown RBP11.1□□□□□ -0.63
USP46-204ENST00000503060 PI15O43692 258 aa11.1□□□□□ -0.63
USP46-204ENST00000503060 DEAF1O75398 565 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms