RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 DDHD1Q8NEL9 900 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 OR6S1Q8NH40 331 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 SEPT8Q92599 483 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 CASP10Q92851 521 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 GMPPAQ96IJ6 420 aaPredicted RBP3.52□□□□□ -1.85
SMC4-225ENST00000497203 LRR1Q96L50 414 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 LURAP1Q96LR2 239 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 NECTIN4Q96NY8 510 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 THAP9Q9H5L6 903 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 VIPAS39Q9H9C1 493 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 DNAJC11Q9NVH1 559 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 RNF186Q9NXI6 227 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 EXOC6BQ9Y2D4 811 aa3.52□□□□□ -1.85
SMC4-225ENST00000497203 DISP3Q9P2K9 1392 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 SPAG9O60271 1321 aaKnown RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 A0A087WZ39 114 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 TMEM129A0AVI4 362 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 CCDC162PA2VCL2 907 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 H0YIG0 161 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 HTATSF1O43719 755 aaKnown RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 AMBPP02760 352 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 GSTA2P09210 222 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 CTNNA2P26232 953 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 TSFMP43897 325 aaKnown RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 ADARP55265 1226 aaKnown RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 GNB1P62873 340 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 FAM106AQ4KMX7 169 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 ATP1A1-AS1Q5TC04 95 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 CHMP1BQ7LBR1 199 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 TRMT11Q7Z4G4 463 aaKnown RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 LAX1Q8IWV1 398 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 TEX26Q8N6G2 289 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 SMAP2Q8WU79 429 aaPredicted RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 AZIN2Q96A70 460 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 OMA1Q96E52 524 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 EPSTI1Q96J88 318 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 NEDD4LQ96PU5 975 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 PCDHB18PQ96TA0 734 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 NAP1L3Q99457 506 aaPredicted RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 DDX50Q9BQ39 737 aaKnown RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 FAM213AQ9BRX8 229 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 UBAC1Q9BSL1 405 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 ACPTQ9BZG2 426 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 WDR13Q9H1Z4 485 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 ZDHHC6Q9H6R6 413 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 PRMT8Q9NR22 394 aaPredicted RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 ATAD3AQ9NVI7 634 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 CYP39A1Q9NYL5 469 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 AKAP7Q9P0M2 348 aaPredicted RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 DBF4Q9UBU7 674 aaPredicted RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 APPL1Q9UKG1 709 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 GAB2Q9UQC2 676 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 ERVK-19Q9WJR5 959 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 KCNK6Q9Y257 313 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 FOXA2Q9Y261 457 aaPredicted RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 TDRKHQ9Y2W6 561 aaKnown RBP3.51□□□□□ -1.85
SMC4-225ENST00000497203 TMED7Q9Y3B3 224 aa3.51□□□□□ -1.85
SMC4-225ENST00000497203 TRBV2A0A0J9YWF9 115 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 MEIOCA2RUB1 952 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 C15orf61A6NNL5 157 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 ZNF732B4DXR9 585 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 TCP10L2B9ZVM9 353 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 SOX3P41225 446 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 CRIP2P52943 208 aaPredicted RBP3.5□□□□□ -1.85
SMC4-225ENST00000497203 UCP2P55851 309 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 CSNK2BP67870 215 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 TRA2AQ13595 282 aaKnown RBP eCLIP3.5□□□□□ -1.852e-10■□□□□ 10.6
SMC4-225ENST00000497203 TSTA3Q13630 321 aaPredicted RBP3.5□□□□□ -1.85
SMC4-225ENST00000497203 MRGPRG-AS1Q2M3A8 158 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 WLSQ5T9L3 541 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 ZNF776Q68DI1 518 aaPredicted RBP3.5□□□□□ -1.85
SMC4-225ENST00000497203 ARHGAP17Q68EM7 881 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 ZNF410Q86VK4 478 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 ELMOD1Q8N336 334 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 SFRP1Q8N474 314 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 DCLK2Q8N568 766 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 GANCQ8TET4 914 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 GUCD1Q96NT3 240 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 KRT12Q99456 494 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 CCM2Q9BSQ5 444 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 MTIF3Q9H2K0 278 aaKnown RBP3.5□□□□□ -1.85
SMC4-225ENST00000497203 MTHFD2LQ9H903 347 aaPredicted RBP3.5□□□□□ -1.85
SMC4-225ENST00000497203 SCRT2Q9NQ03 307 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.5□□□□□ -1.85
SMC4-225ENST00000497203 IL19Q9UHD0 177 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 TEKT2Q9UIF3 430 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 POMT2Q9UKY4 750 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 MYH15Q9Y2K3 1946 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 GPRASP1Q5JY77 1395 aa3.5□□□□□ -1.85
SMC4-225ENST00000497203 ABCC9O60706 1549 aa3.49□□□□□ -1.85
SMC4-225ENST00000497203 hCG_38984A0A1B0GV85 526 aa3.49□□□□□ -1.85
SMC4-225ENST00000497203 IQCMA0A1B0GVH7 501 aa3.49□□□□□ -1.85
SMC4-225ENST00000497203 BICDL2A1A5D9 508 aa3.49□□□□□ -1.85
SMC4-225ENST00000497203 SYCE3A1L190 88 aa3.49□□□□□ -1.85
SMC4-225ENST00000497203 GTPBP10A4D1E9 387 aaKnown RBP3.49□□□□□ -1.85
SMC4-225ENST00000497203 C5orf51A6NDU8 294 aa3.49□□□□□ -1.85
SMC4-225ENST00000497203 SLC15A5A6NIM6 579 aa3.49□□□□□ -1.85
SMC4-225ENST00000497203 ZNF195O14628 629 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms