RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 LIPCP11150 499 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ZNF28P17035 718 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 HNRNPH1P31943 449 aaKnown RBP7.22□□□□□ -1.25
VEGFA-214ENST00000493786 TSFMP43897 325 aaKnown RBP7.22□□□□□ -1.25
VEGFA-214ENST00000493786 HTR6P50406 440 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ARFIP1P53367 373 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 MTTPP55157 894 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 FOXA1P55317 472 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 RPS15P62841 145 aaKnown RBP7.22□□□□□ -1.25
VEGFA-214ENST00000493786 OCA2Q04671 838 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ACSM2AQ08AH3 577 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ABRAXAS2Q15018 415 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 NR6A1Q15406 480 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 PDCD2Q16342 344 aaPredicted RBP7.22□□□□□ -1.25
VEGFA-214ENST00000493786 NKAIN1Q4KMZ8 207 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 SPIN4Q56A73 249 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 SPDYAQ5MJ70 313 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 TCHHL1Q5QJ38 904 aaPredicted RBP7.22□□□□□ -1.25
VEGFA-214ENST00000493786 DEPDC1Q5TB30 811 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ACSM2BQ68CK6 577 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 OR4C11Q6IEV9 310 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ADNP2Q6IQ32 1131 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 VN1R5Q7Z5H4 357 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 NUDT13Q86X67 352 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ZFAND4Q86XD8 727 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 CACNA2D3Q8IZS8 1091 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 DSELQ8IZU8 1212 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 METTL27Q8N6F8 245 aaPredicted RBP7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ZNF781Q8N8C0 355 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 OR9A4Q8NGU2 314 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 UTP15Q8TED0 518 aaKnown RBP7.22□□□□□ -1.25
VEGFA-214ENST00000493786 TWIST2Q8WVJ9 160 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 FGF11Q92914 225 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 MS4A6EQ96DS6 147 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 GBP5Q96PP8 586 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 SERINC2Q96SA4 455 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 HBEGFQ99075 208 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 EFHD1Q9BUP0 239 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 OR51B5Q9H339 312 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 SYNPO2LQ9H987 977 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 LHX9Q9NQ69 397 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 FARSBQ9NSD9 589 aaKnown RBP7.22□□□□□ -1.25
VEGFA-214ENST00000493786 VPS29Q9UBQ0 182 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 VTI1BQ9UEU0 232 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ZDHHC2Q9UIJ5 367 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 ACSL6Q9UKU0 697 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 PADI2Q9Y2J8 665 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 NAALAD2Q9Y3Q0 740 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 MAU2Q9Y6X3 613 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 SPACA6W5XKT8 324 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 PTPRBP23467 1997 aa7.22□□□□□ -1.25
VEGFA-214ENST00000493786 SNRNP200O75643 2136 aaKnown RBP7.21□□□□□ -1.25
VEGFA-214ENST00000493786 A0A0G2JN53 185 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 SERTM1A2A2V5 107 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 ZNF860A6NHJ4 632 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 TMEM233B4DJY2 109 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.21□□□□□ -1.26
VEGFA-214ENST00000493786 SGK494L7N484 410 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 PIP5K1BO14986 540 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 RRP8O43159 456 aaKnown RBP7.21□□□□□ -1.26
VEGFA-214ENST00000493786 FOXS1O43638 330 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 GALR3O60755 368 aaPredicted RBP7.21□□□□□ -1.26
VEGFA-214ENST00000493786 GUCY1B2O75343 617 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 VPS4BO75351 444 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 RDH16O75452 317 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 RSL1D1O76021 490 aaKnown RBP7.21□□□□□ -1.26
VEGFA-214ENST00000493786 LINC00032P0C843 101 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 ITGAXP20702 1163 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 HIST1H1TP22492 207 aaPredicted RBP7.21□□□□□ -1.26
VEGFA-214ENST00000493786 MAPK1P28482 360 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 SERPINB3P29508 390 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 RORAP35398 523 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 OR1D4P47884 311 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 FOXK2Q01167 660 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 HMGCS1Q01581 520 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 OCRLQ01968 901 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 BTKQ06187 659 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 HYAL2Q12891 473 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 DSG2Q14126 1118 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 SLC9A5Q14940 896 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 ADPRMQ3LIE5 342 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 MFSD4BQ5TF39 518 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 MLIPQ5VWP3 458 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 ABHD17CQ6PCB6 329 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 CYP20A1Q6UW02 462 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 SCIMPQ6UWF3 145 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 RNF165Q6ZSG1 346 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 TRIM46Q7Z4K8 759 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 WDR75Q8IWA0 830 aaKnown RBP7.21□□□□□ -1.26
VEGFA-214ENST00000493786 RNF175Q8N4F7 328 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 ZNF248Q8NDW4 579 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 ADAMTS18Q8TE60 1221 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 KCNE4Q8WWG9 221 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 FKBP10Q96AY3 582 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 TUBGCP3Q96CW5 907 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 C19orf60Q96EN9 201 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 PPP3R2Q96LZ3 170 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 C7orf26Q96N11 449 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 SORT1Q99523 831 aa7.21□□□□□ -1.26
VEGFA-214ENST00000493786 NPLQ9BXD5 320 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms