RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TGFBR2P37173 567 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PSMD8P48556 350 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 BCAT1P54687 386 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SLC35A2P78381 396 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ELP6Q0PNE2 266 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 IL18Q14116 193 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 OPCMLQ14982 345 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 NR6A1Q15406 480 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TRAM1Q15629 374 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ADGRF1Q5T601 910 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF648Q5T619 568 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 LIPNQ5VXI9 398 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 HEATR6Q6AI08 1181 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TIFABQ6ZNK6 161 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TIPARPQ7Z3E1 657 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 GPR155Q7Z3F1 870 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 GPC2Q8N158 579 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM41AQ96HV5 264 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PKMYT1Q99640 499 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SRRQ9GZT4 340 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ALX4Q9H161 411 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 AGO3Q9H9G7 860 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 FOLH1BQ9HBA9 442 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ANKEF1Q9NU02 776 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 GFOD1Q9NXC2 390 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PISDQ9UG56 409 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 STAP1Q9ULZ2 295 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TRAPPC4Q9Y296 219 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 LOC105369274A0A096LPK9 316 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 AIPO00170 330 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 LDLRAD4O15165 306 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PEX10O60683 326 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 CREG1O75629 220 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 MT-CYBP00156 380 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 CRYBA1P05813 215 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ACO1P21399 889 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SDC4P31431 198 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 RORCP51449 518 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PLA2G7Q13093 441 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SKP2Q13309 424 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 DOC2AQ14183 400 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PRSS36Q5K4E3 855 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF691Q5VV52 312 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ELP2Q6IA86 826 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TAS1R3Q7RTX0 852 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 MAP4K3Q8IVH8 894 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 OR4N4Q8N0Y3 316 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 NAGSQ8N159 534 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SVOPLQ8N434 492 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 BVESQ8NE79 360 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 OR2L5Q8NG80 312 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ZDHHC1Q8WTX9 485 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 CPNE4Q96A23 557 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ARMC5Q96C12 935 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM74Q96NL1 305 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 RDH12Q96NR8 316 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 C7orf50Q9BRJ6 194 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 FBRSL1Q9HCM7 1045 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 RGS18Q9NS28 235 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 MIOSQ9NXC5 875 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 WWOXQ9NZC7 414 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 CA14Q9ULX7 337 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 AP1M2Q9Y6Q5 423 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 HTTP42858 3142 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 LRIT2A6NDA9 550 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SYNDIG1LA6NDD5 238 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM200CA6NKL6 621 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 UBXN8O00124 270 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 HCN1O60741 890 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 CABYRO75952 493 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SERPINF2P08697 491 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 STSP08842 583 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 HLA-DPA1P20036 260 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 YWHAQP27348 245 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 DSG3P32926 999 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 KCNQ1P51787 676 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 FABP9Q0Z7S8 132 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TAF1AQ15573 450 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 TSTQ16762 297 aaKnown RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 LGALSLQ3ZCW2 172 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 IRAK1BP1Q5VVH5 260 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 NADSYN1Q6IA69 706 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 NAPEPLDQ6IQ20 393 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SLC39A4Q6P5W5 647 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 FAM198BQ6UWH4 519 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SEZ6L2Q6UXD5 910 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ASB18Q6ZVZ8 466 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 SHFQ7M4L6 423 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 NUDT13Q86X67 352 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 FOXRED2Q8IWF2 684 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 Q8N402 240 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ATP6V1C2Q8NEY4 427 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 OR11H4Q8NGC9 324 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 OR52K1Q8NGK4 314 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF675Q8TD23 568 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 ELMOD3Q96FG2 381 aa6.62□□□□□ -1.35
VPS13B-205ENST00000493587 BSCL2Q96G97 398 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-205ENST00000493587 COL21A1Q96P44 957 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms