RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TAPBPO15533 448 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 SMIM10L1P0DMW3 83 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 CD1DP15813 335 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 OR4D1Q15615 310 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 TRADDQ15628 312 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 ZKSCAN8Q15776 578 aaPredicted RBP21.62■■□□□ 1.05
COL9A3-213ENST00000489045 FBXO48Q5FWF7 155 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 ACER2Q5QJU3 275 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 ZNF324BQ6AW86 544 aaPredicted RBP21.62■■□□□ 1.05
COL9A3-213ENST00000489045 GPSM1Q86YR5 675 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 BEST3Q8N1M1 668 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 TCAIMQ8N3R3 496 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 SUN3Q8TAQ9 357 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 SMIM10Q96HG1 83 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 CLK4Q9HAZ1 481 aaKnown RBP21.62■■□□□ 1.05
COL9A3-213ENST00000489045 MMP25Q9NPA2 562 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 OSGIN2Q9Y236 505 aa21.62■■□□□ 1.05
COL9A3-213ENST00000489045 PRAMEF2O60811 474 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 H2AFYO75367 372 aaKnown RBP21.61■■□□□ 1.05
COL9A3-213ENST00000489045 FAM155BO75949 473 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 RNH1P13489 461 aaKnown RBP21.61■■□□□ 1.05
COL9A3-213ENST00000489045 SLC26A5P58743 744 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 RAB10P61026 200 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 ATP6V0D1P61421 351 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 KBTBD12Q3ZCT8 623 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 ZDHHC24Q6UX98 284 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 TMIGD1Q6UXZ0 262 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 QSOX2Q6ZRP7 698 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 ZNF572Q7Z3I7 529 aaPredicted RBP21.61■■□□□ 1.05
COL9A3-213ENST00000489045 CRLF3Q8IUI8 442 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 PPM1NQ8N819 430 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 PTCHD1Q96NR3 888 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 NPAS2Q99743 824 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 RHBGQ9H310 441 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 DNAJC11Q9NVH1 559 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 GPRC5BQ9NZH0 403 aa21.61■■□□□ 1.05
COL9A3-213ENST00000489045 PSMD12O00232 456 aaPredicted RBP21.6■■□□□ 1.05
COL9A3-213ENST00000489045 PRMT3O60678 531 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 SPRP35270 261 aaPredicted RBP21.6■■□□□ 1.05
COL9A3-213ENST00000489045 GGT5P36269 586 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 GMPRP36959 345 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 MAGEA4P43358 317 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 HSPA7P48741 367 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 TDGF1P3P51864 188 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 STXBP1P61764 594 aaKnown RBP21.6■■□□□ 1.05
COL9A3-213ENST00000489045 BTG2P78543 158 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 C4orf17Q53FE4 359 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 CDKL4Q5MAI5 379 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 GRTP1Q5TC63 336 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 CA13Q8N1Q1 262 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 TTLQ8NG68 377 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 CCT6BQ92526 530 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 NR4A3Q92570 626 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 GAL3ST3Q96A11 431 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 ESAMQ96AP7 390 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 UBXN10Q96LJ8 280 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 CAPS2Q9BXY5 557 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 CNOT10Q9H9A5 744 aaKnown RBP21.6■■□□□ 1.05
COL9A3-213ENST00000489045 CD274Q9NZQ7 290 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 CROCCQ5TZA2 2017 aa21.6■■□□□ 1.05
COL9A3-213ENST00000489045 FAM227AF5H4B4 570 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 RASAL1O95294 804 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 MAOAP21397 527 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 HNRNPH1P31943 449 aaKnown RBP21.59■■□□□ 1.05
COL9A3-213ENST00000489045 STX2P32856 288 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 ST13P50502 369 aaKnown RBP21.59■■□□□ 1.05
COL9A3-213ENST00000489045 BTN3A2P78410 334 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 SLMAPQ14BN4 828 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 MEP1AQ16819 746 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 SULT1C3Q6IMI6 304 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 CYP4X1Q8N118 509 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 KRT78Q8N1N4 520 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 SNX31Q8N9S9 440 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 PDPRQ8NCN5 879 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 FBF1Q8TES7 1133 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 EXT2Q93063 718 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 KIAA1191Q96A73 305 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 ABI3Q9P2A4 366 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 COPG2Q9UBF2 871 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 RNF112Q9ULX5 631 aa21.59■■□□□ 1.05
COL9A3-213ENST00000489045 A0A0G2JN53 185 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 CLGNO14967 610 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 LRRTM2O43300 516 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 MAN1A2O60476 641 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 PRAMEF4O60810 478 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 STK16O75716 305 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 CLDN1O95832 211 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 MYBL2P10244 700 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 GSTM2P28161 218 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 TUBA3CQ13748 450 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 EFTUD2Q15029 972 aaKnown RBP eCLIP21.58■■□□□ 1.054e-7■■■■■ 31.4
COL9A3-213ENST00000489045 ZNF766Q5HY98 468 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 PRAMEF9Q5VWM5 478 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 TUBA3EQ6PEY2 450 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 CMC1Q7Z7K0 106 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 KIF2BQ8N4N8 673 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 SLC5A8Q8N695 610 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 MS4A6EQ96DS6 147 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 FAR2Q96K12 515 aa21.58■■□□□ 1.05
COL9A3-213ENST00000489045 NT5DC2Q9H857 520 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms