RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 TGIF1Q15583 401 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 ATG16L1Q676U5 607 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 LCN10Q6JVE6 187 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 TRIM40Q6P9F5 258 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 ABHD17CQ6PCB6 329 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 FAM199XQ6PEV8 388 aaPredicted RBP18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 RNF165Q6ZSG1 346 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 PROSER1Q86XN7 944 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 DTWD1Q8N5C7 304 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 IL22RA1Q8N6P7 574 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 OR9A4Q8NGU2 314 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 FKBP10Q96AY3 582 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 MMABQ96EY8 250 aaPredicted RBP18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 F2RL3Q96RI0 385 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 KCNA7Q96RP8 456 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 CENPKQ9BS16 269 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 EFHD1Q9BUP0 239 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 SHCBP1LQ9BZQ2 653 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 OR51B5Q9H339 312 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 MANSC1Q9H8J5 431 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 NAALAD2Q9Y3Q0 740 aa18.38■□□□□ 0.53
PCOLCE-208ENST00000487172 A0A088AWK7 358 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 LOC101059948A0A1B0GTJ6 334 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 C4orf51C9J302 202 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 KLF11O14901 512 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 ERI3O43414 337 aaKnown RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 ITM2AO43736 263 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 KLHL18O94889 574 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 SEMA3DO95025 777 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 HSPA4LO95757 839 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 TCN2P20062 427 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 ZNF10P21506 573 aaPredicted RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 TSFMP43897 325 aaKnown RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 RAB8AP61006 207 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 BST1Q10588 318 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 CSTF3Q12996 717 aaKnown RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 DEFB134Q4QY38 66 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 TCHHL1Q5QJ38 904 aaPredicted RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 KANK2Q63ZY3 851 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 MRPL14Q6P1L8 145 aaKnown RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 FAM198BQ6UWH4 519 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 COX15Q7KZN9 410 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 OVCH1Q7RTY7 1134 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 PRSS41Q7RTY9 318 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 UBE3DQ7Z6J8 389 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 PDSS2Q86YH6 399 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 KIRREL3Q8IZU9 778 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 GBP7Q8N8V2 638 aaPredicted RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 COL26A1Q96A83 441 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 RGMAQ96B86 450 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 FAR2Q96K12 515 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 TBCDQ9BTW9 1192 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 GPR87Q9BY21 358 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 ROGDIQ9GZN7 287 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 SLC26A1Q9H2B4 701 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 PRDM7Q9NQW5 492 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 FARSBQ9NSD9 589 aaKnown RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 INTS9Q9NV88 658 aaKnown RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 NMRK1Q9NWW6 199 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 IFT80Q9P2H3 777 aaPredicted RBP18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 HAO1Q9UJM8 370 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 RAP2CQ9Y3L5 183 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 TRAF6Q9Y4K3 522 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 MAP4K5Q9Y4K4 846 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 PCDHGA6Q9Y5G7 932 aa18.37■□□□□ 0.53
PCOLCE-208ENST00000487172 WDFY3Q8IZQ1 3526 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 IGLV3-12A0A075B6K2 115 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 C9J4A7 227 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 TAF4O00268 1085 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 SNNO75324 88 aaPredicted RBP18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 SCELO95171 688 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 ETHE1O95571 254 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 FBLP22087 321 aaKnown RBP18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 SERPINB3P29508 390 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 DLSTP36957 453 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 HTR6P50406 440 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 COL9A2Q14055 689 aaPredicted RBP18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 ABRAXAS2Q15018 415 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 SGO1Q5FBB7 561 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 ARHGAP40Q5TG30 622 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 METTL27Q8N6F8 245 aaPredicted RBP18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 ARFGAP2Q8N6H7 521 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 AMER3Q8N944 861 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 CT55Q8WUE5 264 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 ZCCHC14Q8WYQ9 949 aaKnown RBP18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 QRFPRQ96P65 431 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 KCNC2Q96PR1 638 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 NPLQ9BXD5 320 aaPredicted RBP18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 C20orf27Q9GZN8 174 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 ILKAPQ9H0C8 392 aaPredicted RBP18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 PRM3Q9NNZ6 103 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 THAP1Q9NVV9 213 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 ZDHHC2Q9UIJ5 367 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 KCND3Q9UK17 655 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 CROTQ9UKG9 612 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 MAU2Q9Y6X3 613 aa18.36■□□□□ 0.53
PCOLCE-208ENST00000487172 SCN3AQ9NY46 2000 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 SGK494L7N484 410 aa18.35■□□□□ 0.53
PCOLCE-208ENST00000487172 RRP8O43159 456 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms