RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 MPC1LP0DKB6 136 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 MATN1P21941 496 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CD68P34810 354 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CASRP41180 1078 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CDH15P55291 814 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 WDR5P61964 334 aaKnown RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CNPY1Q3B7I2 92 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CYBRD1Q53TN4 286 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 STEAP4Q687X5 459 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 USP53Q70EK8 1073 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 SATL1Q86VE3 508 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 JPH3Q8WXH2 748 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 ZFP3Q96NJ6 502 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 ALPK1Q96QP1 1244 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 SLC17A9Q9BYT1 436 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 SNTG1Q9NSN8 517 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 IL17CQ9P0M4 197 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 APOBEC3BQ9UH17 382 aaKnown RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 ZCWPW2A0A1B0GU75 182 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 OR6C74A6NCV1 312 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 ANXA2P2A6NMY6 339 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 RTCAO00442 366 aaKnown RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 DFNA5O60443 496 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 NPPAP01160 153 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 ANXA2P07355 339 aaKnown RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CD36P16671 472 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 BMP8BP34820 402 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 AAK1Q2M2I8 961 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CYP27C1Q4G0S4 372 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CRTC1Q6UUV9 634 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 ERMP1Q7Z2K6 904 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 BMP8AQ7Z5Y6 402 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 METTL27Q8N6F8 245 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 ZNF689Q96CS4 500 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 SH3YL1Q96HL8 342 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 TPSD1Q9BZJ3 242 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 R3HDMLQ9H3Y0 253 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 OR1A2Q9Y585 309 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CLDN25C9JDP6 229 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 TMEM189-UBE2V1I3L0A0 370 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 MAN2B1O00754 1011 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 SLC16A5O15375 505 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 CBFA2T3O75081 653 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 RBMXL2O75526 392 aaKnown RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 SOX14O95416 240 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 PLGP00747 810 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 RPLP0P05388 317 aaKnown RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 TIA1P31483 386 aaKnown RBP eCLIP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 RPP38P78345 283 aaKnown RBP12.88□□□□□ -0.35
HDLBP-241ENST00000487169 AQP11Q8NBQ7 271 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 OR52E4Q8NGH9 312 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 SUN3Q8TAQ9 357 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 STON2Q8WXE9 905 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 RTP4Q96DX8 246 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 EPYCQ99645 322 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 TSSK6Q9BXA6 273 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 KLHL31Q9H511 634 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 MCCC2Q9HCC0 563 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 IL26Q9NPH9 171 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 PTGDR2Q9Y5Y4 395 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 MYH4Q9Y623 1939 aa12.88□□□□□ -0.35
HDLBP-241ENST00000487169 ZNF99A8MXY4 864 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-241ENST00000487169 TLR4O00206 839 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 PDYNP01213 254 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 C5AR1P21730 350 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 TGFBR2P37173 567 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 KCNC4Q03721 635 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 TIGD6Q17RP2 521 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 OLFML2AQ68BL7 652 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 HCAR2Q8TDS4 363 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 CD180Q99467 661 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 SEC61A2Q9H9S3 476 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 COMMD3Q9UBI1 195 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 HCSTQ9UBK5 93 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 ING4Q9UNL4 249 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 FAM221BA6H8Z2 402 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 AURKAO14965 403 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 PRODHO43272 600 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 TLX2O43763 284 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-241ENST00000487169 IL3P08700 152 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 SMSP52788 366 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 SCN1BQ07699 218 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 NFE2L1Q14494 772 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 NANOGNBQ7Z5D8 188 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 ISCA2Q86U28 154 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 LINC00471Q8N535 108 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 OR2AJ1Q8NGZ0 328 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 NKD1Q969G9 470 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 COQ8BQ96D53 544 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 ZDHHC12Q96GR4 267 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 MCHR1Q99705 422 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 MGME1Q9BQP7 344 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 UCK2Q9BZX2 261 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 MVB12BQ9H7P6 319 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 SMURF2Q9HAU4 748 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 PEX16Q9Y5Y5 336 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 TAF1P21675 1872 aa12.87□□□□□ -0.35
HDLBP-241ENST00000487169 EDIL3O43854 480 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms