RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 WDSUB1Q8N9V3 476 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 DNAAF1Q8NEP3 725 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 BTN2A3PQ96KV6 586 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 CCDC106Q9BWC9 280 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 SEC61A2Q9H9S3 476 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 KCNMB3Q9NPA1 279 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 EIF2B3Q9NR50 452 aaKnown RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 PNO1Q9NRX1 252 aaKnown RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 OXSMQ9NWU1 459 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 ERVK13-1Q9NX77 482 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 TRBV23OR9-2A0A075B6M9 112 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 K7EPI3 171 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 HTRA2O43464 458 aaPredicted RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 ECI2O75521 394 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 SOX14O95416 240 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 BMP8BP34820 402 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 IDH3GP51553 393 aaPredicted RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 PPP5CP53041 499 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 CCL23P55773 120 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 UBXN11Q5T124 520 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 PNCKQ6P2M8 343 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 MBOAT1Q6ZNC8 495 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 BMP8AQ7Z5Y6 402 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 ZNF619Q8N2I2 560 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 ZSCAN4Q8NAM6 433 aaPredicted RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 OR6Q1Q8NGQ2 317 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 CGREF1Q99674 301 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 CNTN3Q9P232 1028 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 OR6C65A6NJZ3 312 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 PROM1O43490 865 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 CREG1O75629 220 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 HTR7P34969 479 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 MRPS6P82932 125 aaKnown RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 CDK3Q00526 305 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 DEFA6Q01524 100 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 PTP4A2Q12974 167 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 GRIK2Q13002 908 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 MINDY4Q4G0A6 757 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 ABHD13Q7L211 337 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 SLC7A5P1Q8MH63 180 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 OR7D4Q8NG98 312 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 OR5B17Q8NGF7 314 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 HMCESQ96FZ2 354 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 EPYCQ99645 322 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 FUNDC2Q9BWH2 189 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 MRPL15Q9P015 296 aaKnown RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 ABI3Q9P2A4 366 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 HEBP2Q9Y5Z4 205 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 SLC34A2O95436 690 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 HOXC8P31273 242 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 HTD2P86397 168 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 MC2RQ01718 297 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 WDR53Q7Z5U6 358 aaPredicted RBP8.49□□□□□ -1.05
GABRE-209ENST00000486255 AMIGO3Q86WK7 504 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 BEST4Q8NFU0 473 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 ARNTL2Q8WYA1 636 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 NR4A3Q92570 626 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 FRZBQ92765 325 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.49□□□□□ -1.05
GABRE-209ENST00000486255 PLEKHA3Q9HB20 300 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 CYP8B1Q9UNU6 501 aa8.49□□□□□ -1.05
GABRE-209ENST00000486255 SH3PXD2BA1X283 911 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CARNS1A5YM72 827 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 MATN3O15232 486 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 IFNGR1P15260 489 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PRKACGP22612 351 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 NRLP54845 237 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CD47Q08722 323 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ST3GAL3Q11203 375 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PRAMEF13Q5VWM6 474 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ELP2Q6IA86 826 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 OR4F3Q6IEY1 312 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CFAP77Q6ZQR2 320 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CHST9Q7L1S5 443 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PXKQ7Z7A4 578 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 NKD2Q969F2 451 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 DNAJC19Q96DA6 116 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZNF486Q96H40 463 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 TTTY10Q9BZA0 68 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 FZD1Q9UP38 647 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 EEF1E1-BLOC1S5C9J1V9 151 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 H0YAE9 185 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CCL22O00626 93 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 INSIG1O15503 277 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 MAFO75444 373 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 PSMD10O75832 226 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 ZBTB48P10074 688 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 CDK2P24941 298 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 PBX1P40424 430 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 DGKEP52429 567 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 SPIN4Q56A73 249 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 C9orf57Q5W0N0 161 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 KANK2Q63ZY3 851 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 SLC39A4Q6P5W5 647 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 CCBE1Q6UXH8 406 aaPredicted RBP8.48□□□□□ -1.05
GABRE-209ENST00000486255 GID4Q8IVV7 300 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 KIAA0319LQ8IZA0 1049 aa8.48□□□□□ -1.05
GABRE-209ENST00000486255 MARVELD2Q8N4S9 558 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms