RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	AKAP3	O75969	853 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	APOH	P02749	345 aa	Predicted RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	CETP	P11597	493 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	GP1BB	P13224	206 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	FER	P16591	822 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	LBP	P18428	481 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	EFNA1	P20827	205 aa	Predicted RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	EPHA2	P29317	976 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	FUT6	P51993	359 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	CDH11	P55287	796 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	NME5	P56597	212 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	DSCR9	P59020	149 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	LGALS3BP	Q08380	585 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	DMPK	Q09013	629 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	TRAP1	Q12931	704 aa	Known RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	NONO	Q15233	471 aa	Known RBP eCLIP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	CCDC6	Q16204	474 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	SGCB	Q16585	318 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	FAM46C	Q5VWP2	391 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	CTR9	Q6PD62	1173 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	GET4	Q7L5D6	327 aa	Predicted RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	RABEPK	Q7Z6M1	372 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	NAGS	Q8N159	534 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	HDDC3	Q8N4P3	179 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	ST7L	Q8TDW4	575 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	FAM20A	Q96MK3	541 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	IL17F	Q96PD4	163 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	RUFY1	Q96T51	708 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	MAP3K3	Q99759	626 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	FSD1	Q9BTV5	496 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	S1PR5	Q9H228	398 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	EVA1A	Q9H8M9	152 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	FAM207A	Q9NSI2	230 aa	Predicted RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	CYP39A1	Q9NYL5	469 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	EPS15L1	Q9UBC2	864 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	C19orf25	Q9UFG5	118 aa	Predicted RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	ISY1	Q9ULR0	285 aa	Known RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	STUB1	Q9UNE7	303 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	TDRKH	Q9Y2W6	561 aa	Known RBP	3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	CENPF	P49454	3210 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	PAPPA2	Q9BXP8	1791 aa		3.56	□□□□□ -1.84
VPS8-223	ENST00000485024	BRCA2	P51587	3418 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	PFAS	O15067	1338 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	GRAP2	O75791	330 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	KRT33A	O76009	404 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	HMOX1	P09601	288 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	ANKRD34C	P0C6C1	535 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	SP9	P0CG40	484 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	GAP43	P17677	238 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	SERPINH1	P50454	418 aa	Known RBP	3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF415	Q09FC8	603 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	C17orf67	Q0P5P2	114 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	RASGEF1B	Q0VAM2	473 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	WASHC5	Q12768	1159 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	OPCML	Q14982	345 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	PPA1	Q15181	289 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	LBH	Q53QV2	105 aa	Predicted RBP	3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	KCTD11	Q693B1	232 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	FAM166A	Q6J272	317 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	BTNL8	Q6UX41	500 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	ZNF852	Q6ZMS4	543 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	G2E3	Q7L622	706 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	PRSS42	Q7Z5A4	293 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	CCDC60	Q8IWA6	550 aa	Predicted RBP	3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	KIAA0895	Q8NCT3	520 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	OR11H4	Q8NGC9	324 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	OR13C3	Q8NGS6	347 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	METTL21A	Q8WXB1	218 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	PIGB	Q92521	554 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	PANX3	Q96QZ0	392 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	FAM213A	Q9BRX8	229 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	C1orf21	Q9H246	121 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	CPVL	Q9H3G5	476 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	CUEDC2	Q9H467	287 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	TLE6	Q9H808	572 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	RPF1	Q9H9Y2	349 aa	Known RBP	3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	MAGEF1	Q9HAY2	307 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	PPAN	Q9NQ55	473 aa	Known RBP	3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	EXOC1	Q9NV70	894 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	TSPAN16	Q9UKR8	245 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	MTF2	Q9Y483	593 aa	Predicted RBP	3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	PCDHGA1	Q9Y5H4	931 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	SBF2	Q86WG5	1849 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	LAMA3	Q16787	3333 aa		3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	INO80	Q9ULG1	1556 aa	Predicted RBP	3.55	□□□□□ -1.84
VPS8-223	ENST00000485024	COL18A1	P39060	1754 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	RBBP6	Q7Z6E9	1792 aa	Known RBP	3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	CFAP54	Q96N23	3096 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	LOC101059948	A0A1B0GTJ6	334 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024		A0A1B0GUV1	79 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	C2orf92	A0A1B0GVN3	265 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	PLSCR5	A0PG75	271 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	SMIM30	A4D0T7	59 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	C17orf105	B2RV13	164 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	C16orf97	H3BN30	126 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	RTCA	O00442	366 aa	Known RBP	3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	CAPN9	O14815	690 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	PRKN	O60260	465 aa	Predicted RBP	3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	HSF2BP	O75031	334 aa		3.54	□□□□□ -1.84
VPS8-223	ENST00000485024	ZBTB11	O95625	1053 aa	Predicted RBP	3.54	□□□□□ -1.84

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