RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 AMZ2Q86W34 360 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 DNAJC22Q8N4W6 341 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 FAM71CQ8NEG0 241 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 OR4C15Q8NGM1 316 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 OR13C3Q8NGS6 347 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 SPATA18Q8TC71 538 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 METTL21AQ8WXB1 218 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 SEPT8Q92599 483 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 GLYATL1Q969I3 302 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 RAB7BQ96AH8 199 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 DTNBP1Q96EV8 351 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 NECTIN4Q96NY8 510 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 TAAR6Q96RI8 345 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 COQ7Q99807 217 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 DPEP2Q9H4A9 486 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 DPEP3Q9H4B8 488 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 TMEM231Q9H6L2 316 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 LRRC4Q9HBW1 653 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 AATFQ9NY61 560 aaKnown RBP eCLIP4.08□□□□□ -1.76
VPS13A-211ENST00000484581 TMOD3Q9NYL9 352 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 OR6C2Q9NZP2 312 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 NDUFA13Q9P0J0 144 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 CACNA1IQ9P0X4 2223 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 EXTL2Q9UBQ6 330 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 TEKT2Q9UIF3 430 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 MRPS2Q9Y399 296 aaKnown RBP4.08□□□□□ -1.76
VPS13A-211ENST00000484581 COLEC10Q9Y6Z7 277 aa4.08□□□□□ -1.76
VPS13A-211ENST00000484581 ARID2Q68CP9 1835 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 NCAPD2Q15021 1401 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 A0A087WZY1 265 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 SAA2-SAA4A0A096LPE2 208 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 A0A0U1RRA0 63 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 A0A1B0GWJ7 208 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 EEF2KO00418 725 aaKnown RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 ATP6V0E1O15342 81 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 SYT7O43581 403 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 PRKNO60260 465 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 NME2P1O60361 137 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 LRP3O75074 770 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 GMNNO75496 209 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 SCGB2A1O75556 95 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 TSPY4P0CV99 314 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 TSPY10P0CW01 314 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 CETPP11597 493 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 FCARP24071 287 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 STIP1P31948 543 aaKnown RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 HSPA1LP34931 641 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 TNFRSF4P43489 277 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 NUMBP49757 651 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 ZXDBP98169 803 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 PMP22Q01453 160 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 KIF5AQ12840 1032 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 CDH18Q13634 790 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 XKR3Q5GH77 459 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 NKAIN2Q5VXU1 208 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 ZNF776Q68DI1 518 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 ZNF549Q6P9A3 640 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 TUBA1AQ71U36 451 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 G2E3Q7L622 706 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 GBP7Q8N8V2 638 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 MINDY2Q8NBR6 621 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 TRPV3Q8NET8 790 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 UBTD2Q8WUN7 234 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 ARHGAP45Q92619 1136 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 RTP4Q96DX8 246 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 C16orf58Q96GQ5 468 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 THOC3Q96J01 351 aaKnown RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 SSX3Q99909 188 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 TUBA1CQ9BQE3 449 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 NTPCRQ9BSD7 190 aaKnown RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 NUSAP1Q9BXS6 441 aaKnown RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 NMNAT2Q9BZQ4 307 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 SHARPINQ9H0F6 387 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 HIPK2Q9H2X6 1198 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 CENPMQ9NSP4 180 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 CNOT2Q9NZN8 540 aaKnown RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 CLIP2Q9UDT6 1046 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 C19orf25Q9UFG5 118 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-211ENST00000484581 PILRBQ9UKJ0 227 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 TNNQ9UQP3 1299 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 RIPK3Q9Y572 518 aa4.07□□□□□ -1.76
VPS13A-211ENST00000484581 SERINC4A6NH21 518 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 SLC22A2O15244 555 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 DFFBO76075 338 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 NR3C1P04150 777 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 KRT8P05787 483 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 ACAA1P09110 424 aaPredicted RBP4.06□□□□□ -1.76
VPS13A-211ENST00000484581 CT45A8P0DMV1 189 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 CT45A9P0DMV2 189 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 RALAP11233 206 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 ODC1P11926 461 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 LIFP15018 202 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 PRDX6P30041 224 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 OR1D2P34982 312 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 TRPC1P48995 793 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 HNMTP50135 292 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 CCL11P51671 97 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 ARFIP1P53367 373 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 HERV-K104P61576 105 aa4.06□□□□□ -1.76
VPS13A-211ENST00000484581 MYL7Q01449 175 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms