RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ANXA8P13928 327 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 ATF6P18850 670 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 TIE1P35590 1138 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 GGT2P36268 569 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 SLC16A1P53985 500 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 CXCR4P61073 352 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 CDK6Q00534 326 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 SCN1BQ07699 218 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 HSPB3Q12988 150 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 TARDBPQ13148 414 aaKnown RBP eCLIP12.23□□□□□ -0.454e-7■■□□□ 12.9
VPS52-218ENST00000482399 TCEA2Q15560 299 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 ZC3H12BQ5HYM0 836 aaKnown RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 RPS26P11Q5JNZ5 115 aaPredicted RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 USP45Q70EL2 814 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 TRIM46Q7Z4K8 759 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 LILRA3Q8N6C8 439 aaPredicted RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 PIK3R3Q92569 461 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 TMCO6Q96DC7 493 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 SLC22A12Q96S37 553 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 TBC1D17Q9HA65 648 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 MUTYHQ9UIF7 546 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 RUVBL1Q9Y265 456 aaKnown RBP12.23□□□□□ -0.45
VPS52-218ENST00000482399 PIKFYVEQ9Y2I7 2098 aa12.23□□□□□ -0.45
VPS52-218ENST00000482399 FAM240BA0A1B0GVZ2 78 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 IFNW1P05000 195 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 JUNDP17535 347 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 GPC1P35052 558 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 GSTM5P46439 218 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 RING1Q06587 406 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 GPR17Q13304 367 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 GAB1Q13480 694 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 NCF4Q15080 339 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 CRTC2Q53ET0 693 aaPredicted RBP12.22□□□□□ -0.45
VPS52-218ENST00000482399 GPRC6AQ5T6X5 926 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 PAQR6Q6TCH4 344 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 THOC6Q86W42 341 aaKnown RBP12.22□□□□□ -0.45
VPS52-218ENST00000482399 LSRQ86X29 649 aaPredicted RBP12.22□□□□□ -0.45
VPS52-218ENST00000482399 CLP1Q92989 425 aaKnown RBP12.22□□□□□ -0.45
VPS52-218ENST00000482399 HTATIP2Q9BUP3 242 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 NTMT1Q9BV86 223 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 SLC29A3Q9BZD2 475 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 MBD1Q9UIS9 605 aaPredicted RBP12.22□□□□□ -0.45
VPS52-218ENST00000482399 CCL27Q9Y4X3 112 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 ZNF840PA6NDX5 716 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 CASKO14936 926 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 CH25HO95992 272 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 CR2P20023 1033 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 ITGA1P56199 1179 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 IL18Q14116 193 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 RGNQ15493 299 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 CLEC12AQ5QGZ9 265 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 Q6ZVL8 140 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 TRAPPC5Q8IUR0 188 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 APH1BQ8WW43 257 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 XAGE5Q8WWM1 108 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 POFUT2Q9Y2G5 429 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 MRPS7Q9Y2R9 242 aaKnown RBP12.22□□□□□ -0.45
VPS52-218ENST00000482399 MYO9BQ13459 2157 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 ENTPD6O75354 484 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 KLK1P06870 262 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 CLEC2LP0C7M8 214 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 MYL12AP19105 171 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 BMPR1AP36894 532 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 RORCP51449 518 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 ARPC4P59998 168 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 SRP54P61011 504 aaKnown RBP12.22□□□□□ -0.45
VPS52-218ENST00000482399 CCSMST1Q4G0I0 132 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 OLIG3Q7RTU3 272 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 PTOV1Q86YD1 416 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 COQ8BQ96D53 544 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 HRASLS5Q96KN8 279 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 YIPF4Q9BSR8 244 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 LINC00597Q9H2U6 94 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 UCKL1Q9NWZ5 548 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 NDUFAF4Q9P032 175 aa12.22□□□□□ -0.45
VPS52-218ENST00000482399 LSM7Q9UK45 103 aaKnown RBP12.22□□□□□ -0.45
VPS52-218ENST00000482399 A0A1B0GVC2 190 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 MEIOCA2RUB1 952 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 A6NIN4 97 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 SMLR1H3BR10 107 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 MEN1O00255 615 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 BCHEP06276 602 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 TUFMP49411 452 aaKnown RBP12.21□□□□□ -0.45
VPS52-218ENST00000482399 TAS2R50P59544 299 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 IFITM2Q01629 132 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 TBCEQ15813 527 aaPredicted RBP12.21□□□□□ -0.45
VPS52-218ENST00000482399 SMU1Q2TAY7 513 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 TRIM40Q6P9F5 258 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 SERPINA11Q86U17 422 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 RTN4RL1Q86UN2 441 aaPredicted RBP12.21□□□□□ -0.45
VPS52-218ENST00000482399 CMTM8Q8IZV2 173 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 SORBS1Q9BX66 1292 aaKnown RBP12.21□□□□□ -0.45
VPS52-218ENST00000482399 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.21□□□□□ -0.45
VPS52-218ENST00000482399 ZDHHC3Q9NYG2 299 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 CARD8Q9Y2G2 431 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 KCNE2Q9Y6J6 123 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 HSPE1-MOB4S4R3N1 261 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 CACNA1CQ13936 2221 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 TLR4O00206 839 aa12.21□□□□□ -0.45
VPS52-218ENST00000482399 YY2O15391 372 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms