RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 OXNAD1Q96HP4 312 aaPredicted RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 PCYT2Q99447 389 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CITED1Q99966 193 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CLSTN2Q9H4D0 955 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 PPP1R3EQ9H7J1 279 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 SLC38A10Q9HBR0 1119 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 AGPAT3Q9NRZ7 376 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ACSS1Q9NUB1 689 aaPredicted RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 CNOT6Q9ULM6 557 aaKnown RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 SH3GLB1Q9Y371 365 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 GRIP1Q9Y3R0 1128 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 BTBD17A6NE02 478 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ARHGAP42A6NI28 874 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ACOD1A6NK06 481 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 MAP2K7O14733 419 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 SPP1P10451 314 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CPN1P15169 458 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 SLC1A3P43003 542 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CCL11P51671 97 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 NUDT6P53370 316 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 BIVMQ86UB2 503 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 TMC8Q8IU68 726 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 KBTBD2Q8IY47 623 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 PAQR4Q8N4S7 273 aaPredicted RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 DEFB123Q8N688 67 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 OLIG1Q8TAK6 271 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 HM13Q8TCT9 377 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 BTBD9Q96Q07 612 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ANKRA2Q9H9E1 313 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 MRPL47Q9HD33 250 aaKnown RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 TBC1D7Q9P0N9 293 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ATP6V1HQ9UI12 483 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 TSPAN16Q9UKR8 245 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 FOXJ3Q9UPW0 622 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 NR2E1Q9Y466 385 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 STON1Q9Y6Q2 735 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 DOCK8Q8NF50 2099 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 TRBV5-7A0A0A0MS05 114 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 C13orf42A0A1B0GVH6 325 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 C9orf118A6NHY6 69 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ANHXE9PGG2 379 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 TEX46H3BTG2 121 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 GRID2O43424 1007 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 VPS26AO75436 327 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 MTRF1O75570 445 aaKnown RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 MOCS3O95396 460 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 GH2P01242 217 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ASNSP08243 561 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CALCBP10092 127 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ZNF37AP17032 561 aaPredicted RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 TPSB2P20231 275 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 S1PR1P21453 382 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 NF2P35240 595 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CRYBB1P53674 252 aaPredicted RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 RPS7P62081 194 aaKnown RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 MFSD13AQ14CX5 517 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 TPSAB1Q15661 275 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CAMK4Q16566 473 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 FILIP1LQ4L180 1135 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ZMAT1Q5H9K5 638 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CCNYL2Q5T2Q4 361 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CASC4Q6P4E1 433 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 Q6ZWC4 215 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 SPRED1Q7Z699 444 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CLNKQ7Z7G1 428 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ADHFE1Q8IWW8 467 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 FAM71CQ8NEG0 241 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 MDGA1Q8NFP4 955 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 OR10T2Q8NGX3 314 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 STARD8Q92502 1023 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 RPL3LQ92901 407 aaKnown RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 MRPL53Q96EL3 112 aaKnown RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 ZNF582Q96NG8 517 aaPredicted RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 MMS19Q96T76 1030 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 DDX47Q9H0S4 455 aaKnown RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 HHATLQ9HCP6 504 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 ZCCHC3Q9NUD5 404 aaKnown RBP3.12□□□□□ -1.91
SMC6-208ENST00000481708 CRLS1Q9UJA2 301 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 FZD10Q9ULW2 581 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 CARD8Q9Y2G2 431 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 NFE2L3Q9Y4A8 694 aa3.12□□□□□ -1.91
SMC6-208ENST00000481708 PCM1Q15154 2024 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 A0A1B0GTQ1 180 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 GABRR3A8MPY1 467 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 SLC28A1O00337 649 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 CASC3O15234 703 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 MSI1O43347 362 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 CCNT1O60563 726 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 ERN1O75460 977 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 STAMBPO95630 424 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 NR2F6P10588 404 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 CAPGP40121 348 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 APOBEC1P41238 236 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 ALDH7A1P49419 539 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 LINC00310P59036 64 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 MYL6P60660 151 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ZXDBP98169 803 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 ILKQ13418 452 aa3.11□□□□□ -1.91
SMC6-208ENST00000481708 MVPQ14764 893 aaKnown RBP3.11□□□□□ -1.91
SMC6-208ENST00000481708 MAPK11Q15759 364 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms