RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 SPRED1Q7Z699 444 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 MFSD9Q8NBP5 474 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 UCN3Q969E3 161 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 LOXL4Q96JB6 756 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 BRINP2Q9C0B6 783 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 REXO4Q9GZR2 422 aaKnown RBP17.24■□□□□ 0.35
ATG4B-217ENST00000475693 SEMA6CQ9H3T2 930 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 NDE1Q9NXR1 346 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 MRPS2Q9Y399 296 aaKnown RBP17.24■□□□□ 0.35
ATG4B-217ENST00000475693 H0YGG7 62 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 FBP2O00757 339 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 CDX4O14627 284 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-217ENST00000475693 DNAJB6O75190 326 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 SLC22A3O75751 556 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 CAPN3P20807 821 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 PRPH2P23942 346 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 ARF3P61204 181 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-217ENST00000475693 CCL7P80098 99 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 SLC25A3Q00325 362 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 MC1RQ01726 317 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 EFCAB3Q8N7B9 438 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 RCN3Q96D15 328 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 SLC7A8Q9UHI5 535 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 PCDHGA5Q9Y5G8 931 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 AP1M2Q9Y6Q5 423 aa17.24■□□□□ 0.35
ATG4B-217ENST00000475693 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.24■□□□□ 0.35
ATG4B-217ENST00000475693 GNG14A0A1W2PPG7 69 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 A0A1W2PQM1 296 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 ANXA4P09525 319 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-217ENST00000475693 VSX2P58304 361 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-217ENST00000475693 CYLC2Q14093 348 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-217ENST00000475693 TOR1AIP1Q5JTV8 583 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 KLHL35Q6PF15 583 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 ZNF574Q6ZN55 896 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-217ENST00000475693 KBTBD2Q8IY47 623 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 ZCCHC10Q8TBK6 192 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 ZUFSPQ96AP4 578 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 TEFMQ96QE5 360 aaKnown RBP17.23■□□□□ 0.35
ATG4B-217ENST00000475693 CCDC3Q9BQI4 270 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 NT5DC2Q9H857 520 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 WASHC1A8K0Z3 465 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 ERI3O43414 337 aaKnown RBP17.23■□□□□ 0.35
ATG4B-217ENST00000475693 PCDH7O60245 1069 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 DFNA5O60443 496 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 HSD3B1P14060 373 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 EFNA1P20827 205 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-217ENST00000475693 HSD3B2P26439 372 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 CUL3Q13618 768 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 CACHD1Q5VU97 1274 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 LAIR1Q6GTX8 287 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 ZNF793Q6ZN11 406 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 RETREG3Q86VR2 466 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 C19orf47Q8N9M1 422 aaKnown RBP17.23■□□□□ 0.35
ATG4B-217ENST00000475693 MS4A6EQ96DS6 147 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 SERPINI1Q99574 410 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 ZFYVE21Q9BQ24 234 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 ECSITQ9BQ95 431 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 PPT2Q9UMR5 302 aa17.23■□□□□ 0.35
ATG4B-217ENST00000475693 PCDHGA12O60330 932 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 PIM1P11309 404 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-217ENST00000475693 TPP2P29144 1249 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-217ENST00000475693 BSGP35613 385 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 TIGD2Q4W5G0 525 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 RNF220Q5VTB9 566 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 PRSS41Q7RTY9 318 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 METTL4Q8N3J2 472 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 RCBTB1Q8NDN9 531 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 OR8K5Q8NH50 307 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 TRIM8Q9BZR9 551 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 IL1RL2Q9HB29 575 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 SLC52A3Q9NQ40 469 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 SLAMF8Q9P0V8 285 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 PACSIN3Q9UKS6 424 aa17.22■□□□□ 0.35
ATG4B-217ENST00000475693 ASPDHA6ND91 283 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 GDF9O60383 454 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 CLEC3AO75596 197 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 LYNP07948 512 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 CPOXP36551 454 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 DPP6P42658 865 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 RPS15AP62244 130 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 PHEXP78562 749 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 DAB2P98082 770 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 PDCD4Q53EL6 469 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 ASPGQ86U10 573 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 OR7A2PQ8NGA2 310 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 IFI44Q8TCB0 444 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 SARGQ9BW04 601 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 DPY30Q9C005 99 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 VCX3BQ9H321 246 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 PARD6AQ9NPB6 346 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 SOHLH2Q9NX45 425 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 EXO1Q9UQ84 846 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 TSC22D4Q9Y3Q8 395 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 RIF1Q5UIP0 2472 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 TMPRSS11DO60235 418 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 PRKRAO75569 313 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 RPLP0P05388 317 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 RETP07949 1114 aa17.21■□□□□ 0.35
ATG4B-217ENST00000475693 SNRPB2P08579 225 aaKnown RBP17.21■□□□□ 0.35
ATG4B-217ENST00000475693 HRH2P25021 359 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms