RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 RUNDC3BQ96NL0 473 aa2.2□□□□□ -2.06
SSB-208ENST00000468600 ABHD1Q96SE0 405 aa2.2□□□□□ -2.06
SSB-208ENST00000468600 ZHX3Q9H4I2 956 aa2.2□□□□□ -2.06
SSB-208ENST00000468600 MYOZ2Q9NPC6 264 aa2.2□□□□□ -2.06
SSB-208ENST00000468600 TBC1D22BQ9NU19 505 aa2.2□□□□□ -2.06
SSB-208ENST00000468600 DHRS4-AS1Q9P1J3 65 aa2.2□□□□□ -2.06
SSB-208ENST00000468600 A8MU76 341 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 CREB3O43889 395 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 PGM3O95394 542 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 MYL6BP14649 208 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 RIPK4P57078 832 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 MEA1Q16626 185 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 ZNF530Q6P9A1 599 aaPredicted RBP2.19□□□□□ -2.06
SSB-208ENST00000468600 CENPVQ7Z7K6 275 aaPredicted RBP2.19□□□□□ -2.06
SSB-208ENST00000468600 PRUNE1Q86TP1 453 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 TLK2Q86UE8 772 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 ZNF525Q8N782 197 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 BANPQ8N9N5 519 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 U2AF1L4Q8WU68 220 aaKnown RBP2.19□□□□□ -2.06
SSB-208ENST00000468600 GTSF1Q8WW33 167 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 P2RX5Q93086 422 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 PPP1R16AQ96I34 528 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 GDAP1L1Q96MZ0 367 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 PINK1Q9BXM7 581 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 DEFB126Q9BYW3 111 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 MYH16Q9H6N6 1097 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 SP140LQ9H930 580 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 IARS2Q9NSE4 1012 aaKnown RBP2.19□□□□□ -2.06
SSB-208ENST00000468600 CPSF2Q9P2I0 782 aaKnown RBP2.19□□□□□ -2.06
SSB-208ENST00000468600 SLC12A6Q9UHW9 1150 aa2.19□□□□□ -2.06
SSB-208ENST00000468600 hCG_1809904A0A1W2PP81 198 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 A0A1W2PPE2 198 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 A0A1W2PR64 198 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 IGLON5A6NGN9 336 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 LMO7DNF2Z398 122 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 RECQL5O94762 991 aaPredicted RBP2.18□□□□□ -2.06
SSB-208ENST00000468600 PIGRP01833 764 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 DNTTP04053 509 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 PROS1P07225 676 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 ERVPABLB-1P60509 514 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 SNTB1Q13884 538 aaKnown RBP2.18□□□□□ -2.06
SSB-208ENST00000468600 PCK2Q16822 640 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 ARMCX5Q6P1M9 558 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 TTC27Q6P3X3 843 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 FUT10Q6P4F1 479 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 TEX19Q8NA77 164 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 PYCR2Q96C36 320 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 ZNF799Q96GE5 643 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 PAXXQ9BUH6 204 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 KCNK13Q9HB14 408 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.18□□□□□ -2.06
SSB-208ENST00000468600 ZNF275Q9NSD4 429 aaPredicted RBP2.18□□□□□ -2.06
SSB-208ENST00000468600 AGTPBP1Q9UPW5 1226 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 COLEC10Q9Y6Z7 277 aa2.18□□□□□ -2.06
SSB-208ENST00000468600 FOXI3A8MTJ6 420 aaPredicted RBP2.17□□□□□ -2.06
SSB-208ENST00000468600 SPRY1O43609 319 aaPredicted RBP2.17□□□□□ -2.06
SSB-208ENST00000468600 KIF5CO60282 957 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 FRAT2O75474 233 aaPredicted RBP2.17□□□□□ -2.06
SSB-208ENST00000468600 BEST1O76090 585 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 EPORP19235 508 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 BTG1P62324 171 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 RBPJQ06330 500 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 SULT2A1Q06520 285 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 ACSM1Q08AH1 577 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 ALCAMQ13740 583 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 FASTKQ14296 549 aaKnown RBP2.17□□□□□ -2.06
SSB-208ENST00000468600 SLC22A6Q4U2R8 563 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 IGFL2Q6UWQ7 119 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 TRMT11Q7Z4G4 463 aaKnown RBP2.17□□□□□ -2.06
SSB-208ENST00000468600 COX8CQ7Z4L0 72 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 C5orf24Q7Z6I8 188 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 IQCHQ86VS3 1027 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 AMIGO1Q86WK6 493 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 CCDC63Q8NA47 563 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 SKA1Q96BD8 255 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 LINC00615Q96LM1 132 aaPredicted RBP2.17□□□□□ -2.06
SSB-208ENST00000468600 SIGLEC12Q96PQ1 595 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 PCDHB18PQ96TA0 734 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 HSD17B14Q9BPX1 270 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 SDF4Q9BRK5 362 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 XAB2Q9HCS7 855 aaKnown RBP2.17□□□□□ -2.06
SSB-208ENST00000468600 BLOC1S4Q9NUP1 217 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 ZNF346Q9UL40 294 aaKnown RBP2.17□□□□□ -2.06
SSB-208ENST00000468600 CLEC4EQ9ULY5 219 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 SATB2Q9UPW6 733 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 CPQQ9Y646 472 aa2.17□□□□□ -2.06
SSB-208ENST00000468600 TRAV9-2A0A087WT02 112 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 ZSCAN5CA6NGD5 496 aaPredicted RBP2.16□□□□□ -2.06
SSB-208ENST00000468600 FBP2O00757 339 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 ANGPTL1O95841 491 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 MT-ND2P03891 347 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 GOT1P17174 413 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 TNFRSF4P43489 277 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 CSE1LP55060 971 aaKnown RBP2.16□□□□□ -2.06
SSB-208ENST00000468600 UCNP55089 124 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 ARMC4Q5T2S8 1044 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 RFWD3Q6PCD5 774 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 C15orf52Q6ZUT6 534 aaKnown RBP2.16□□□□□ -2.06
SSB-208ENST00000468600 GPR141Q7Z602 305 aa2.16□□□□□ -2.06
SSB-208ENST00000468600 ANKRD13CQ8N6S4 541 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms