RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 VTI1BQ9UEU0 232 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 ZFP69BQ9UJL9 534 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 SCN2AQ99250 2005 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 ZFHX4Q86UP3 3567 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 CROCCQ5TZA2 2017 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 LOC105369274A0A096LPK9 316 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 LOC102723532A0A0G2JNH3 316 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 GOLGA8QA0A0J9YX86 632 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 GOLGA8OA6NCC3 632 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 GOLGA8NF8WBI6 632 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 TOX3O15405 576 aaPredicted RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 NDUFS4O43181 175 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 ETHE1O95571 254 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 FAM107AO95990 144 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 TGFB1P01137 390 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 SERPIND1P05546 499 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 CTSBP07858 339 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 AHRP35869 848 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 RPS13P62277 151 aaKnown RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 HSD11B2P80365 405 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 ILKQ13418 452 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 COL9A2Q14055 689 aaPredicted RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 XKR7Q5GH72 579 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 PHF19Q5T6S3 580 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 EPGNQ6UW88 154 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 Q6ZSR9 355 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 VN1R4Q7Z5H5 301 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 GLRX5Q86SX6 157 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 OR4N4Q8N0Y3 316 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 TBC1D19Q8N5T2 526 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 LINC00469Q8N7U9 141 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 TTLQ8NG68 377 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 LILRB1Q8NHL6 650 aaPredicted RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 WDR48Q8TAF3 677 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 CCT6BQ92526 530 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 SLC41A2Q96JW4 573 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 SIKE1Q9BRV8 207 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 ZNF768Q9H5H4 540 aaKnown RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 WDR55Q9H6Y2 383 aaPredicted RBP6.55□□□□□ -1.36
SCAF4-204ENST00000467731 NT5DC2Q9H857 520 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 DMRT3Q9NQL9 472 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 KLHL14Q9P2G3 628 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 SATB2Q9UPW6 733 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 TSC22D4Q9Y3Q8 395 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 AP1M2Q9Y6Q5 423 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 LAMA5O15230 3695 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 FER1L5A0AVI2 2057 aa6.55□□□□□ -1.36
SCAF4-204ENST00000467731 TRPC5OSA6NMA1 111 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 TM4SF5O14894 197 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 SNX3O60493 162 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 EIF2S1P05198 315 aaKnown RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 ANKRD34CP0C6C1 535 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 NELFEP18615 380 aaKnown RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 PIK3CBP42338 1070 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 ARL4DP49703 201 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 CLDN6P56747 220 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 RELAQ04206 551 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 TUBA3CQ13748 450 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 IMPG1Q17R60 797 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 C10orf62Q5T681 223 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 RNF220Q5VTB9 566 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 TRIM46Q7Z4K8 759 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 LILRB2Q8N423 598 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 DNAJC22Q8N4W6 341 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 GOLM1Q8NBJ4 401 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 MFSD9Q8NBP5 474 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 CREB3L4Q8TEY5 395 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 SLC13A3Q8WWT9 602 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 KLHL6Q8WZ60 621 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 TMEM120AQ9BXJ8 343 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 OR51B5Q9H339 312 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 TPK1Q9H3S4 243 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 BRF2Q9HAW0 419 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 TBCCD1Q9NVR7 557 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 GIMAP2Q9UG22 337 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 SLC12A4Q9UP95 1085 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 CCL27Q9Y4X3 112 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 PCDHGA1Q9Y5H4 931 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 H0YGG7 62 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 FOXE1O00358 373 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 SAP18O00422 153 aaKnown RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 SDHDO14521 159 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 P2RX6O15547 441 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 MAP3K7O43318 606 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 SLC35G6P0C7Q6 338 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 FOLR1P15328 257 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 GABRA4P48169 554 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 IDH3AP50213 366 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 VSX2P58304 361 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 ARF3P61204 181 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 INSM1Q01101 510 aaPredicted RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 ZNF33BQ06732 778 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 ZFP36L1Q07352 338 aaKnown RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 CSTF3Q12996 717 aaKnown RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 LSAMPQ13449 338 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 NR6A1Q15406 480 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 HKDC1Q2TB90 917 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 GALNTL6Q49A17 601 aa6.54□□□□□ -1.36
SCAF4-204ENST00000467731 ZC3H12BQ5HYM0 836 aaKnown RBP6.54□□□□□ -1.36
SCAF4-204ENST00000467731 FAM209AQ5JX71 171 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms