RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 HUS1BQ8NHY5 278 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 STT3BQ8TCJ2 826 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 COL26A1Q96A83 441 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 MAGEB10Q96LZ2 347 aaPredicted RBP10.46□□□□□ -0.73
MSH5-212ENST00000467319 CATSPER2Q96P56 530 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 CDK15Q96Q40 435 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 SMC6Q96SB8 1091 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 CLK4Q9HAZ1 481 aaKnown RBP10.46□□□□□ -0.73
MSH5-212ENST00000467319 ACSS2Q9NR19 701 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 OXSMQ9NWU1 459 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 SLC17A7Q9P2U7 560 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 TRPC4Q9UBN4 977 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 TRPS1Q9UHF7 1281 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 ADGRE2Q9UHX3 823 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 MID2Q9UJV3 735 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 LHX6Q9UPM6 363 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 PCDHGA11Q9Y5H2 935 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 ACTL7BQ9Y614 415 aa10.46□□□□□ -0.73
MSH5-212ENST00000467319 URADA6NGE7 173 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 ANKDD1BA6NHY2 528 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 FFAR3O14843 346 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 GPR42O15529 346 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 ERI3O43414 337 aaKnown RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 SPAG7O75391 227 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 SUPT7LO94864 414 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 BMP10O95393 424 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 MLYCDO95822 493 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 B3GALT4O96024 378 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 TSPAN8P19075 237 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 MMP11P24347 488 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 HPDP32754 393 aaPredicted RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 RAB8AP61006 207 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 NAA20P61599 178 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 RHDQ02161 417 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 KLC1Q07866 573 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 ERV3-1Q14264 604 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 CASP8Q14790 479 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 ZRSR2Q15696 482 aaKnown RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 CPSF6Q16630 551 aaKnown RBP eCLIP10.45□□□□□ -0.74
MSH5-212ENST00000467319 TMEM35AQ53FP2 167 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 KHDRBS2Q5VWX1 349 aaKnown RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 LIPMQ5VYY2 423 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 FRG2Q64ET8 278 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 ABHD17CQ6PCB6 329 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 MED25Q71SY5 747 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 UBE3DQ7Z6J8 389 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 EXOC3L1Q86VI1 746 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 RAB43Q86YS6 212 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 MYLK4Q86YV6 388 aaPredicted RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 ARMC2Q8NEN0 867 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 OR4F6Q8NGB9 312 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 OR5T3Q8NGG3 340 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 TCP10LQ8TDR4 215 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 AGAP11Q8TF27 550 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 THAP4Q8WY91 577 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 NACC2Q96BF6 587 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 MIEF2Q96C03 454 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 REPS1Q96D71 796 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 KCNC2Q96PR1 638 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 FAM111AQ96PZ2 611 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 FRG2BQ96QU4 278 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 OR1F2PQ96R84 312 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 ZNF717Q9BY31 904 aaPredicted RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 REXO4Q9GZR2 422 aaKnown RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 IQCGQ9H095 443 aaKnown RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 SOX17Q9H6I2 414 aaPredicted RBP10.45□□□□□ -0.74
MSH5-212ENST00000467319 LANCL2Q9NS86 450 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 HCN3Q9P1Z3 774 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 POLHQ9Y253 713 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 STK38LQ9Y2H1 464 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 HS3ST3B1Q9Y662 390 aa10.45□□□□□ -0.74
MSH5-212ENST00000467319 CDC14CA4D256 554 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 MAGEB17A8MXT2 336 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 ERVH48-1M5A8F1 160 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 FOXE1O00358 373 aaPredicted RBP10.44□□□□□ -0.74
MSH5-212ENST00000467319 UBFD1O14562 309 aaKnown RBP10.44□□□□□ -0.74
MSH5-212ENST00000467319 DNAJB6O75190 326 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 SEMA3DO95025 777 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 ETHE1O95571 254 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 PCNAP12004 261 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 XCR1P46094 333 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 ARFIP1P53367 373 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 NAGLUP54802 743 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 PKNOX1P55347 436 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 OCA2Q04671 838 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 CUL3Q13618 768 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 ATP1A4Q13733 1029 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 SSPNQ14714 243 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 RBBP7Q16576 425 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 TBR1Q16650 682 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 VWA2Q5GFL6 755 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 FAM219BQ5XKK7 198 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 ZNF793Q6ZN11 406 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 SHISA6Q6ZSJ9 500 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 GPRIN3Q6ZVF9 776 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 C10orf107Q8IVU9 208 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 APLFQ8IW19 511 aaPredicted RBP10.44□□□□□ -0.74
MSH5-212ENST00000467319 RNF175Q8N4F7 328 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 OR6Y1Q8NGX8 325 aa10.44□□□□□ -0.74
MSH5-212ENST00000467319 OR51Q1Q8NH59 317 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms