RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ZNF468Q5VIY5 522 aaPredicted RBP18.55■□□□□ 0.56
VARS-221ENST00000463184 CHERPQ8IWX8 916 aaKnown RBP18.55■□□□□ 0.56
VARS-221ENST00000463184 MYO1HQ8N1T3 1032 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 TBC1D19Q8N5T2 526 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 OR4K1Q8NGD4 311 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 CHTF18Q8WVB6 975 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 HIST1H2AHQ96KK5 128 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 DMRTA2Q96SC8 542 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 HIST1H2AJQ99878 128 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 H2AFJQ9BTM1 129 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 ENKD1Q9H0I2 346 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 TAS2R13Q9NYV9 303 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 SNX24Q9Y343 169 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 UTP11Q9Y3A2 253 aaKnown RBP18.55■□□□□ 0.56
VARS-221ENST00000463184 ASB1Q9Y576 335 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 MAD1L1Q9Y6D9 718 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 CACNA1CQ13936 2221 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 C2CD3Q4AC94 2353 aa18.55■□□□□ 0.56
VARS-221ENST00000463184 CHST10O43529 356 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 OR1F1O43749 312 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 SEC31AO94979 1220 aaKnown RBP18.54■□□□□ 0.56
VARS-221ENST00000463184 MAGEA3P43357 314 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 RPL21P46778 160 aaKnown RBP18.54■□□□□ 0.56
VARS-221ENST00000463184 ITGA8P53708 1063 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 HSF1Q00613 529 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 TIAL1Q01085 375 aaKnown RBP eCLIP18.54■□□□□ 0.56
VARS-221ENST00000463184 DEFB134Q4QY38 66 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 HSP90AA5PQ58FG0 334 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 RNFT1Q5M7Z0 435 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 DUPD1Q68J44 220 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 C8orf74Q6P047 294 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 NCCRP1Q6ZVX7 275 aaPredicted RBP18.54■□□□□ 0.56
VARS-221ENST00000463184 STRA8Q7Z7C7 330 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 KIF2BQ8N4N8 673 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 CPSF7Q8N684 471 aaKnown RBP18.54■□□□□ 0.56
VARS-221ENST00000463184 POGLUT1Q8NBL1 392 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 ACBD4Q8NC06 268 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 CA5BP1Q8WTZ4 195 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 TMEM125Q96AQ2 219 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 SIGLEC10Q96LC7 697 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 PTCHD1Q96NR3 888 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 RAB17Q9H0T7 212 aa18.54■□□□□ 0.56
VARS-221ENST00000463184 CLK4Q9HAZ1 481 aaKnown RBP18.54■□□□□ 0.56
VARS-221ENST00000463184 IARS2Q9NSE4 1012 aaKnown RBP18.54■□□□□ 0.56
VARS-221ENST00000463184 TRBC2A0A5B9 178 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 ADAM10O14672 748 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 PRMT3O60678 531 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 B4GALT2O60909 372 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 TRHRP34981 398 aaPredicted RBP18.53■□□□□ 0.56
VARS-221ENST00000463184 MLF1P58340 268 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 KRTAP10-9P60411 292 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 RGS1Q08116 209 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 DHX9Q08211 1270 aaKnown RBP18.53■□□□□ 0.56
VARS-221ENST00000463184 PHKG1Q16816 387 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 PAQR3Q6TCH7 311 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 QSOX2Q6ZRP7 698 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 ABHD13Q7L211 337 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 AGGF1Q8N302 714 aaeCLIP18.53■□□□□ 0.56
VARS-221ENST00000463184 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.53■□□□□ 0.56
VARS-221ENST00000463184 C2CD4AQ8NCU7 369 aaPredicted RBP18.53■□□□□ 0.56
VARS-221ENST00000463184 GABPB2Q8TAK5 448 aaPredicted RBP18.53■□□□□ 0.56
VARS-221ENST00000463184 NDNQ99608 321 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 COQ3Q9NZJ6 369 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 WHRNQ9P202 907 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 PPT2Q9UMR5 302 aa18.53■□□□□ 0.56
VARS-221ENST00000463184 CCDC168Q8NDH2 2452 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 PABPN1LA6NDY0 278 aaKnown RBP18.52■□□□□ 0.56
VARS-221ENST00000463184 FCHO1O14526 889 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 ZNHIT1O43257 154 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 DNAJB6O75190 326 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 SERPIND1P05546 499 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 HLCSP50747 726 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 OLR1P78380 273 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 TLE4Q04727 773 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 CALCOCO2Q13137 446 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 TESK1Q15569 626 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 ZNF227Q86WZ6 799 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 CYP4X1Q8N118 509 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 OR56A3Q8NH54 315 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 NT5CQ8TCD5 201 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 SDCCAG3Q96C92 435 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 LRRC1Q9BTT6 524 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 DPH5Q9H2P9 285 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 MCCC2Q9HCC0 563 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 ARL15Q9NXU5 204 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 ZFP69BQ9UJL9 534 aa18.52■□□□□ 0.56
VARS-221ENST00000463184 KLF13Q9Y2Y9 288 aaPredicted RBP18.52■□□□□ 0.56
VARS-221ENST00000463184 URADA6NGE7 173 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 SAGE2PA6NJ88 616 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 KLRC4-KLRK1H3BQV0 150 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 ZNF888P0CJ79 500 aaPredicted RBP18.51■□□□□ 0.55
VARS-221ENST00000463184 AP1S2P56377 157 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 BTG2P78543 158 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 GLE1Q53GS7 698 aaKnown RBP18.51■□□□□ 0.55
VARS-221ENST00000463184 SPNS3Q6ZMD2 512 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 C3P1Q6ZMU1 363 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 MEX3BQ6ZN04 569 aaKnown RBP18.51■□□□□ 0.55
VARS-221ENST00000463184 FGD2Q7Z6J4 655 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 CDH24Q86UP0 819 aa18.51■□□□□ 0.55
VARS-221ENST00000463184 ARMC10Q8N2F6 343 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms