RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 PCDH1Q08174 1060 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 IFT88Q13099 833 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 CPSF6Q16630 551 aaKnown RBP eCLIP17.13■□□□□ 0.33
RER1-206ENST00000462129 FAM214AQ32MH5 1076 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 WASHC2DQ5SRD0 308 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 C10orf62Q5T681 223 aaPredicted RBP17.13■□□□□ 0.33
RER1-206ENST00000462129 YOD1Q5VVQ6 348 aaPredicted RBP17.13■□□□□ 0.33
RER1-206ENST00000462129 L3MBTL4Q8NA19 623 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 OR4F6Q8NGB9 312 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 OR52B6Q8NGF0 335 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 OR1L3Q8NH93 324 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 SLC13A3Q8WWT9 602 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 CLIP3Q96DZ5 547 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 OR2A5Q96R48 311 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 CENPKQ9BS16 269 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 SARGQ9BW04 601 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 GATA5Q9BWX5 397 aaPredicted RBP17.13■□□□□ 0.33
RER1-206ENST00000462129 GSTO2Q9H4Y5 243 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 ELOVL6Q9H5J4 265 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 ZBTB26Q9HCK0 441 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 INTS9Q9NV88 658 aaKnown RBP17.13■□□□□ 0.33
RER1-206ENST00000462129 TRPS1Q9UHF7 1281 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 KCND3Q9UK17 655 aa17.13■□□□□ 0.33
RER1-206ENST00000462129 CREBBPQ92793 2442 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 NRP2O60462 931 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 CPNE3O75131 537 aaKnown RBP17.12■□□□□ 0.33
RER1-206ENST00000462129 WFS1O76024 890 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 SNUPNO95149 360 aaKnown RBP17.12■□□□□ 0.33
RER1-206ENST00000462129 HSPA4LO95757 839 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 CHEK2O96017 543 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 KRT6AP02538 564 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 KRT6BP04259 564 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 ENO1P06733 434 aaKnown RBP17.12■□□□□ 0.33
RER1-206ENST00000462129 DHRS4L1P0CG22 281 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 EPORP19235 508 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 KRT6CP48668 564 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 STXBP1P61764 594 aaKnown RBP17.12■□□□□ 0.33
RER1-206ENST00000462129 SKP1P63208 163 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 PWP1Q13610 501 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 DDX39BQ13838 428 aaKnown RBP17.12■□□□□ 0.33
RER1-206ENST00000462129 RCN2Q14257 317 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 GGTA1PQ4G0N0 100 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 ATG16L1Q676U5 607 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 FRMPD2BQ6IN97 320 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 ZCCHC23Q6ZST2 131 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.12■□□□□ 0.33
RER1-206ENST00000462129 KIRREL3Q8IZU9 778 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 AFAP1L2Q8N4X5 818 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 ZNF740Q8NDX6 193 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 CDK15Q96Q40 435 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 ACTR5Q9H9F9 607 aaPredicted RBP17.12■□□□□ 0.33
RER1-206ENST00000462129 ACSS2Q9NR19 701 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 NDOR1Q9UHB4 597 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 RNF11Q9Y3C5 154 aa17.12■□□□□ 0.33
RER1-206ENST00000462129 MDC1Q14676 2089 aaKnown RBP17.11■□□□□ 0.33
RER1-206ENST00000462129 TMEM114B3SHH9 223 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 ZNF749O43361 778 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 CREG1O75629 220 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 OR4F21O95013 312 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 ESRRBO95718 433 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 GABRA4P48169 554 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 TGM3Q08188 693 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 TRAF3Q13114 568 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 STX3Q13277 289 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 DNASE1L3Q13609 305 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 MPP2Q14168 576 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
RER1-206ENST00000462129 MUM1Q2TAK8 710 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 GARNL3Q5VVW2 1013 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 RAB3IL1Q8TBN0 382 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 METTL6Q8TCB7 284 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 TRIM55Q9BYV6 548 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 SLC29A3Q9BZD2 475 aa17.11■□□□□ 0.33
RER1-206ENST00000462129 SPRTNQ9H040 489 aaPredicted RBP17.11■□□□□ 0.33
RER1-206ENST00000462129 A0A088AWK7 358 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 LOC105369274A0A096LPK9 316 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 LOC102723532A0A0G2JNH3 316 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 HYKKA2RU49 373 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 H0YIV9 168 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 FFAR3O14843 346 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 GPR42O15529 346 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 LCMT2O60294 686 aaKnown RBP17.1■□□□□ 0.33
RER1-206ENST00000462129 CLEC3AO75596 197 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 KLK3P07288 261 aaPredicted RBP17.1■□□□□ 0.33
RER1-206ENST00000462129 CCNYL3P0C7X3 344 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 CHN1P15882 459 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 ZNF10P21506 573 aaPredicted RBP17.1■□□□□ 0.33
RER1-206ENST00000462129 BGNP21810 368 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 PGDP52209 483 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 NADK2Q4G0N4 442 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 ZNF787Q6DD87 383 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 PWWP2BQ6NUJ5 590 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 LETMD1Q6P1Q0 360 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 ABHD13Q7L211 337 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 SYVN1Q86TM6 617 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 APLFQ8IW19 511 aaPredicted RBP17.1■□□□□ 0.33
RER1-206ENST00000462129 LAS2Q8IYD9 372 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 OR4N4Q8N0Y3 316 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 CDYL2Q8N8U2 506 aa17.1■□□□□ 0.33
RER1-206ENST00000462129 OR7G3Q8NG95 312 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms