RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 PCDHB18PQ96TA0 734 aa2.41□□□□□ -2.02
SCARNA18-201ENST00000459004 PUS3Q9BZE2 481 aaKnown RBP2.41□□□□□ -2.02
SCARNA18-201ENST00000459004 SATB2Q9UPW6 733 aa2.41□□□□□ -2.02
SCARNA18-201ENST00000459004 NCKAP1Q9Y2A7 1128 aa2.41□□□□□ -2.02
SCARNA18-201ENST00000459004 A0A0B4J203 849 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 ARHGEF33A8MVX0 844 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 WDR46O15213 610 aaKnown RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 INPP4BO15327 924 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 GALR3O60755 368 aaPredicted RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 TBCAO75347 108 aaKnown RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 ZFYP08048 801 aaPredicted RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 ANKRD34CP0C6C1 535 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 EEF2P13639 858 aaKnown RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 SELEP16581 610 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 IFNAR1P17181 557 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 LBPP18428 481 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 KRT2P35908 639 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 GP5P40197 560 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 CLCN4P51793 760 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 ZFP36L1Q07352 338 aaKnown RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 CETN1Q12798 172 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 LRRC37A5PQ49AS3 106 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 FAM46CQ5VWP2 391 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 KLHL10Q6JEL2 608 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 TRAT1Q6PIZ9 186 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 Q6ZVQ6 151 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 SLC25A42Q86VD7 318 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 MEX3DQ86XN8 651 aaKnown RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 CATSPER3Q86XQ3 398 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 OR4N5Q8IXE1 308 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 THNSL1Q8IYQ7 743 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 DND1Q8IYX4 353 aaKnown RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 SLC39A11Q8N1S5 342 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 C11orf52Q96A22 123 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 BSCL2Q96G97 398 aaPredicted RBP2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 ZNF577Q9BSK1 485 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 EDEM3Q9BZQ6 932 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 DPEP2Q9H4A9 486 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 C5orf66Q9H5L9 145 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 MINDY3Q9H8M7 445 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 PDRG1Q9NUG6 133 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 TMOD3Q9NYL9 352 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 PILRAQ9UKJ1 303 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 RARRES3Q9UL19 164 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 PCDHGA1Q9Y5H4 931 aa2.4□□□□□ -2.03
SCARNA18-201ENST00000459004 ILVBLA1L0T0 632 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 LMO7DNF2Z398 122 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 PDHXO00330 501 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 IFIT3O14879 490 aaKnown RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 OGTO15294 1046 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 SIGLEC5O15389 551 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 BCL2L11O43521 198 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 SCO2O43819 266 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 SELENOFO60613 162 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 LRCH4O75427 683 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 DLATP10515 647 aaKnown RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 SOAT1P35610 550 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 PRKCIP41743 596 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 ATP4BP51164 291 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 LIMK2P53671 638 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 NDUFV3P56181 108 aaKnown RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 ABCE1P61221 599 aaKnown RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 BTG1P62324 171 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 SRPXP78539 464 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 GCKRQ14397 625 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 PSMD6Q15008 389 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 MLF2Q15773 248 aaPredicted RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 ZRANB3Q5FWF4 1079 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 ARMCX4Q5H9R4 360 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 ZNF770Q6IQ21 691 aaPredicted RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 Q6ZR54 194 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 ANKRD46Q86W74 232 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 MARCH9Q86YJ5 346 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 CREBRFQ8IUR6 639 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 ZC3H3Q8IXZ2 948 aaKnown RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 SSC4DQ8WTU2 575 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 DNASE1L2Q92874 299 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 FAM162AQ96A26 154 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 EXOC4Q96A65 974 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 SGF29Q96ES7 293 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 INTS14Q96SY0 518 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 FNDC4Q9H6D8 234 aaPredicted RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 JPT2Q9H910 190 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 C3orf14Q9HBI5 128 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 IL1RAPQ9NPH3 570 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 DBF4Q9UBU7 674 aaPredicted RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 NRBP1Q9UHY1 535 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 NOCTQ9UK39 431 aaKnown RBP2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 GMEB2Q9UKD1 530 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 TSPAN16Q9UKR8 245 aa2.39□□□□□ -2.03
SCARNA18-201ENST00000459004 TP53BP1Q12888 1972 aaPredicted RBP2.38□□□□□ -2.03
SCARNA18-201ENST00000459004 C2orf92A0A1B0GVN3 265 aa2.38□□□□□ -2.03
SCARNA18-201ENST00000459004 SRRM5B3KS81 715 aa2.38□□□□□ -2.03
SCARNA18-201ENST00000459004 SHISA9B4DS77 424 aa2.38□□□□□ -2.03
SCARNA18-201ENST00000459004 ZNF732B4DXR9 585 aa2.38□□□□□ -2.03
SCARNA18-201ENST00000459004 MLNRO43193 412 aa2.38□□□□□ -2.03
SCARNA18-201ENST00000459004 ADORA3P0DMS8 318 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms