RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SLC22A14Q9Y267 594 aa14.81□□□□□ -0.04
CHCHD3-204ENST00000457942 SNX24Q9Y343 169 aa14.81□□□□□ -0.04
CHCHD3-204ENST00000457942 KCNE2Q9Y6J6 123 aa14.81□□□□□ -0.04
CHCHD3-204ENST00000457942 NCF1BA6NI72 391 aaPredicted RBP14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 NCF1CA8MVU1 366 aaPredicted RBP14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 FAM227AF5H4B4 570 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 WDR47O94967 919 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 NCF1P14598 390 aaPredicted RBP14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 PTGER4P35408 488 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 AHRP35869 848 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 TDGF1P3P51864 188 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 TAS2R39P59534 338 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 OC90Q02509 493 aaPredicted RBP14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 RBPJQ06330 500 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 CALCOCO2Q13137 446 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 ART3Q13508 389 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 FRG1Q14331 258 aaKnown RBP14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 USP10Q14694 798 aaKnown RBP14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 PPP1R3AQ16821 1122 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 ZNF324BQ6AW86 544 aaPredicted RBP14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 NXPE4Q6UWF7 544 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 MRGPRGQ86SM5 289 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 AFAP1L2Q8N4X5 818 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 PLPP5Q8NEB5 264 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 TRPV3Q8NET8 790 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 DNAJB8Q8NHS0 232 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 CCT6BQ92526 530 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 PTCHD1Q96NR3 888 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 GPAMQ9HCL2 828 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 MMP25Q9NPA2 562 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 KLHL1Q9NR64 748 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 SUCOQ9UBS9 1254 aaKnown RBP14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 OARD1Q9Y530 152 aa14.8□□□□□ -0.04
CHCHD3-204ENST00000457942 PRMT3O60678 531 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 CD46P15529 392 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 RPL21P46778 160 aaKnown RBP14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 HNMTP50135 292 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 SLC26A5P58743 744 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 KRTAP10-9P60411 292 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 MRPS25P82663 173 aaKnown RBP14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 TUBA3CQ13748 450 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 OR1C1Q15619 314 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 TSNQ15631 228 aaKnown RBP14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 TOR1AIP1Q5JTV8 583 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 TUBA3EQ6PEY2 450 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 BNC2Q6ZN30 1099 aaPredicted RBP14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 ANKRD53Q8N9V6 530 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 BBOF1Q8ND07 529 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 UTP15Q8TED0 518 aaKnown RBP14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 PYROXD1Q8WU10 500 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 CDKL2Q92772 493 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 FAR2Q96K12 515 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 DPH5Q9H2P9 285 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 RHOJQ9H4E5 214 aa14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 KLF2Q9Y5W3 355 aaPredicted RBP14.79□□□□□ -0.04
CHCHD3-204ENST00000457942 MYO7BQ6PIF6 2116 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 GABRR3A8MPY1 467 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 CCL21O00585 134 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 DNAJB6O75190 326 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 H2AFYO75367 372 aaKnown RBP14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 PIAS1O75925 651 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 RNH1P13489 461 aaKnown RBP14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 MST1P26927 711 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 EEF1DP29692 281 aaKnown RBP14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 CDKL1Q00532 357 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 HORMAD2Q8N7B1 307 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 TMEM178AQ8NBL3 297 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 ARMC2Q8NEN0 867 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 ANKRD49Q8WVL7 239 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 ANKRD7Q92527 254 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 TSPAN17Q96FV3 270 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 SAYSD1Q9NPB0 183 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 WWOXQ9NZC7 414 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 RNF14Q9UBS8 474 aa14.78□□□□□ -0.04
CHCHD3-204ENST00000457942 A8MUA0 341 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 E7ESA3 106 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 MLYCDO95822 493 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 GNAZP19086 355 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 MAOAP21397 527 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 CASP6P55212 293 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 STXBP1P61764 594 aaKnown RBP14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 SLBPQ14493 270 aaKnown RBP eCLIP14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 C18orf21Q32NC0 220 aaPredicted RBP14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 H3F3CQ6NXT2 135 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 QSOX2Q6ZRP7 698 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 CEP97Q8IW35 865 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 KIF2BQ8N4N8 673 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 FAM98AQ8NCA5 519 aaKnown RBP14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 RELTQ969Z4 430 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 SIGLEC12Q96PQ1 595 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 HES7Q9BYE0 225 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 SLC6A16Q9GZN6 736 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 KLHL31Q9H511 634 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 CDCP1Q9H5V8 836 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 CAB39LQ9H9S4 337 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 POPDC3Q9HBV1 291 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 MOCS1Q9NZB8 636 aa14.77□□□□□ -0.05
CHCHD3-204ENST00000457942 A0A0G2JN53 185 aa14.76□□□□□ -0.05
CHCHD3-204ENST00000457942 CTAGE15A4D2H0 777 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms