RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 EBLN1P0CF75 366 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 UROSP10746 265 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 LBPP18428 481 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 JAK1P23458 1154 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 SLC6A2P23975 617 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 HTR1EP28566 365 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 PKLRP30613 574 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 SHMT2P34897 504 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 TAP2Q03519 686 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 UGT3A2Q3SY77 523 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 SYVN1Q86TM6 617 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 OR52B6Q8NGF0 335 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 OR52E1Q8NGJ3 308 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 HDAC2Q92769 488 aaKnown RBP15.21■□□□□ 0.03
SNX17-204ENST00000453453 TMEM125Q96AQ2 219 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 EFHD2Q96C19 240 aaPredicted RBP15.21■□□□□ 0.03
SNX17-204ENST00000453453 LRRC58Q96CX6 371 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 IL17FQ96PD4 163 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 NTMT1Q9BV86 223 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 SGPP1Q9BX95 441 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 NUSAP1Q9BXS6 441 aaKnown RBP15.21■□□□□ 0.03
SNX17-204ENST00000453453 RAD21L1Q9H4I0 556 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 TMEM74BQ9NUR3 256 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 INTS7Q9NVH2 962 aaKnown RBP15.21■□□□□ 0.03
SNX17-204ENST00000453453 CPNE7Q9UBL6 633 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 SNX11Q9Y5W9 270 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 TMEM131Q92545 1883 aa15.21■□□□□ 0.03
SNX17-204ENST00000453453 PRR33A8MZF0 331 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 LMO7DNF2Z398 122 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 NR5A2O00482 541 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 PPP6CO00743 305 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 PIAS2O75928 621 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 OR4F21O95013 312 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 PRSS23O95084 383 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 CLDN9O95484 217 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 CFIP05156 583 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 HGFP14210 728 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 SLC19A1P41440 591 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 BNIP3Q12983 259 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 TRAF3Q13114 568 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 PLCL1Q15111 1095 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 ZXDCQ2QGD7 858 aaPredicted RBP15.21■□□□□ 0.02
SNX17-204ENST00000453453 PRAMEF14Q5SWL7 426 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 PRAMEF13Q5VWM6 474 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 KANK2Q63ZY3 851 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 ZC3H14Q6PJT7 736 aaKnown RBP15.21■□□□□ 0.02
SNX17-204ENST00000453453 SPPL2CQ8IUH8 684 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 OR4F6Q8NGB9 312 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 OR2L8Q8NGY9 312 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 LCN9Q8WX39 176 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 FBXL20Q96IG2 436 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 ELF4Q99607 663 aaPredicted RBP15.21■□□□□ 0.02
SNX17-204ENST00000453453 NANOGQ9H9S0 305 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 HMG20AQ9NP66 347 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 TRPS1Q9UHF7 1281 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 RAB23Q9ULC3 237 aa15.21■□□□□ 0.02
SNX17-204ENST00000453453 PCM1Q15154 2024 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 HTR3EA5X5Y0 456 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 TMEM247A6NEH6 219 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 DFNA5O60443 496 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 UGDHO60701 494 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 HOXB6P17509 224 aaKnown RBP15.2■□□□□ 0.02
SNX17-204ENST00000453453 IRF8Q02556 426 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 OCA2Q04671 838 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 OXA1LQ15070 435 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 CLEC6AQ6EIG7 209 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 BLOC1S3Q6QNY0 202 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 IL27RAQ6UWB1 636 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 LCTLQ6UWM7 567 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 LRRC56Q8IYG6 542 aaPredicted RBP15.2■□□□□ 0.02
SNX17-204ENST00000453453 PARP8Q8N3A8 854 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 SLC15A4Q8N697 577 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 CDYL2Q8N8U2 506 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 METTL6Q8TCB7 284 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 POP5Q969H6 163 aaKnown RBP15.2■□□□□ 0.02
SNX17-204ENST00000453453 CDK15Q96Q40 435 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 SLX1AQ9BQ83 275 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 AKTIPQ9H8T0 292 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 TNFRSF12AQ9NP84 129 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 ICKQ9UPZ9 632 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 CSNK1G3Q9Y6M4 447 aa15.2■□□□□ 0.02
SNX17-204ENST00000453453 PI4KAP42356 2102 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 A0A1W2PP18 115 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 CLDN25C9JDP6 229 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 YY2O15391 372 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 YKT6O15498 198 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 SDC3O75056 442 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 EEDO75530 441 aaKnown RBP15.19■□□□□ 0.02
SNX17-204ENST00000453453 CDH1P12830 882 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 CAPN3P20807 821 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 CD247P20963 164 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 PRDX3P30048 256 aaKnown RBP15.19■□□□□ 0.02
SNX17-204ENST00000453453 RXRGP48443 463 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 GSK3BP49841 420 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 ALDH3A2P51648 485 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 ERVPABLB-1P60509 514 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 UBE2IP63279 158 aaKnown RBP15.19■□□□□ 0.02
SNX17-204ENST00000453453 CHIT1Q13231 466 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 CYP51A1Q16850 503 aa15.19■□□□□ 0.02
SNX17-204ENST00000453453 TRIM16LQ309B1 348 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms