RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 BARX2Q9UMQ3 279 aaPredicted RBP4.09□□□□□ -1.75
LINC00393-202ENST00000452852 INSL5Q9Y5Q6 135 aa4.09□□□□□ -1.75
LINC00393-202ENST00000452852 ATXN2Q99700 1313 aaKnown RBP4.09□□□□□ -1.75
LINC00393-202ENST00000452852 VPS13AQ96RL7 3174 aa4.09□□□□□ -1.76
LINC00393-202ENST00000452852 DENND4AQ7Z401 1863 aa4.09□□□□□ -1.76
LINC00393-202ENST00000452852 BRWD1Q9NSI6 2320 aa4.09□□□□□ -1.76
LINC00393-202ENST00000452852 A0A1W2PP11 408 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 A0A1W2PPW3 197 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 BDP1A6H8Y1 2624 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 NEMP2A6NFY4 417 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 CAPN9O14815 690 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 CTDSPLO15194 276 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 MSH4O15457 936 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 PRPSAP2O60256 369 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 FCGR3BO75015 233 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 PGLSO95336 258 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 SMIM18P0DKX4 95 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 DARSP14868 501 aaKnown RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 HOXB8P17481 243 aaPredicted RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 DESP17661 470 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 TYMPP19971 482 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 FASLGP48023 281 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 LHX1P48742 406 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 GPC3P51654 580 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 PLXNA3P51805 1871 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 CTSCP53634 463 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 HSD17B7P56937 341 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 EVCP57679 992 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 GSDMDP57764 484 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 NCBP1Q09161 790 aaKnown RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 GAGE2BQ13066 116 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 PRKAA1Q13131 559 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 GIT2Q14161 759 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 NONOQ15233 471 aaKnown RBP eCLIP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 AMZ1Q400G9 498 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 IQCCQ4KMZ1 466 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 GAGE2EQ4V326 116 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 XKR3Q5GH77 459 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 GCNT6Q5T4J0 391 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 RUSC1-AS1Q66K80 236 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 C2orf16Q68DN1 1984 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 TXNRD3NBQ6F5E7 133 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 PRR27Q6MZM9 219 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 GAGE2AQ6NT46 116 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 CYB5D1Q6P9G0 228 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 ISLR2Q6UXK2 745 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 DGLUCYQ7Z3D6 616 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 ZNF410Q86VK4 478 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 CHERPQ8IWX8 916 aaKnown RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 BLIDQ8IZY5 108 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 FBXL16Q8N461 479 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 C1orf52Q8N6N3 182 aaKnown RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 TEX9Q8N6V9 391 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 RTL3Q8N8U3 475 aaKnown RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 PAPD5Q8NDF8 572 aaKnown RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 OR52I2Q8NH67 350 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 TBCKQ8TEA7 893 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 MOB3AQ96BX8 217 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 TXNDC15Q96J42 360 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 SPATA13Q96N96 652 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 NECTIN4Q96NY8 510 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 CASD1Q96PB1 797 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 KLHL5Q96PQ7 755 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 OSBPL8Q9BZF1 889 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 ABCG8Q9H221 673 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 CWH43Q9H720 699 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 DNAJC4Q9NNZ3 241 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 GAGE2DQ9UEU5 116 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 APPL1Q9UKG1 709 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 MYO15AQ9UKN7 3530 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 FBXW2Q9UKT8 454 aa4.08□□□□□ -1.76
LINC00393-202ENST00000452852 PIN4Q9Y237 131 aaKnown RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 MTCL1Q9Y4B5 1905 aaKnown RBP4.08□□□□□ -1.76
LINC00393-202ENST00000452852 NCOR1O75376 2440 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 MYO7AQ13402 2215 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 MAGEA13PA6NCF6 341 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 C5orf51A6NDU8 294 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 LOC730098B7Z3J9 87 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 TTI1O43156 1089 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 CRCPO75575 148 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 ERLIN2O94905 339 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 BAG4O95429 457 aaKnown RBP4.07□□□□□ -1.76
LINC00393-202ENST00000452852 TDP2O95551 362 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 CXCL14O95715 111 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 CH25HO95992 272 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 LCATP04180 440 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 CSN3P07498 182 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 ANKRD34CP0C6C1 535 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 SPP1P10451 314 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 GCFC2P16383 781 aaKnown RBP4.07□□□□□ -1.76
LINC00393-202ENST00000452852 VCLP18206 1134 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 EPORP19235 508 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 SSTR2P30874 369 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 HOXA11P31270 313 aaPredicted RBP4.07□□□□□ -1.76
LINC00393-202ENST00000452852 CCKBRP32239 447 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 FRKP42685 505 aaPredicted RBP4.07□□□□□ -1.76
LINC00393-202ENST00000452852 QARSP47897 775 aaKnown RBP4.07□□□□□ -1.76
LINC00393-202ENST00000452852 RFX2P48378 723 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 RGS7P49802 495 aa4.07□□□□□ -1.76
LINC00393-202ENST00000452852 ENTPD1P49961 510 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms