RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 PTP4A1Q93096 173 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 MARC2Q969Z3 335 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 SEPHS2Q99611 448 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 SLC39A10Q9ULF5 831 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 ERI2A8K979 691 aaKnown RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 PROM1O43490 865 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 PPM1BO75688 479 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 SCO1O75880 301 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 PGLSO95336 258 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 ALDOCP09972 364 aaKnown RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 HOXB2P14652 356 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 ERCC2P18074 760 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 IL1RNP18510 177 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 MSH3P20585 1137 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 DDCP20711 480 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 HOXA6P31267 233 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 SLC12A2P55011 1212 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 POLR2GP62487 172 aaKnown RBP eCLIP12.59□□□□□ -0.39
DDX56-206ENST00000446987 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.59□□□□□ -0.39
DDX56-206ENST00000446987 NFYCQ13952 458 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 DGCR6Q14129 220 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 USP10Q14694 798 aaKnown RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 GRM3Q14832 879 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 AANATQ16613 207 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 KIF19Q2TAC6 998 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 VPS26BQ4G0F5 336 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 KDM4DQ6B0I6 523 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 ZNF783Q6ZMS7 281 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 NUDT18Q6ZVK8 323 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 KCNMB4Q86W47 210 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 GDPD1Q8N9F7 314 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 MDGA1Q8NFP4 955 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 FRS2Q8WU20 508 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 ASB15Q8WXK1 588 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 DACT3Q96B18 629 aaPredicted RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 MOCOSQ96EN8 888 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 C19orf60Q96EN9 201 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 RPL10LQ96L21 214 aaKnown RBP12.59□□□□□ -0.39
DDX56-206ENST00000446987 SLC6A17Q9H1V8 727 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 GORASP2Q9H8Y8 452 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 KLHL20Q9Y2M5 609 aa12.59□□□□□ -0.39
DDX56-206ENST00000446987 E5RI56 91 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 TSPAN4O14817 238 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 FGF10O15520 208 aaPredicted RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 PTP4A3O75365 173 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 IPO13O94829 963 aaKnown RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 MT-CO1P00395 513 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 FGF4P08620 206 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 TRIM23P36406 574 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 PER3P56645 1201 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 RAB10P61026 200 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 CD83Q01151 205 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 CSTF1Q05048 431 aaKnown RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 HYAL2Q12891 473 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 EOGTQ5NDL2 527 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 CACHD1Q5VU97 1274 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 MLIPQ5VWP3 458 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 CYHR1Q6ZMK1 362 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 UTS2BQ765I0 119 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 TRMT11Q7Z4G4 463 aaKnown RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 RAB44Q7Z6P3 723 aaPredicted RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 TAGAPQ8N103 731 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 OR8H2Q8N162 312 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 UMODL1-AS1Q8N2C9 162 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 ZNF540Q8NDQ6 660 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 ANKRD49Q8WVL7 239 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 ISG20Q96AZ6 181 aaKnown RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 HMCESQ96FZ2 354 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 ZC3HAV1LQ96H79 300 aaKnown RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 AHCYL2Q96HN2 611 aaKnown RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 HDHD5Q9BXW7 423 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 MAGIXQ9H6Y5 334 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 SYNDIG1Q9H7V2 258 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 SMURF2Q9HAU4 748 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 CD93Q9NPY3 652 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 LEF1Q9UJU2 399 aaPredicted RBP12.58□□□□□ -0.4
DDX56-206ENST00000446987 PCDHB14Q9Y5E9 798 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 SHROOM3Q8TF72 1996 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 FRYLO94915 3013 aa12.58□□□□□ -0.4
DDX56-206ENST00000446987 B4DXG7 233 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 K7ERQ8 282 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 NPC1O15118 1278 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 FADS2O95864 444 aaKnown RBP12.57□□□□□ -0.4
DDX56-206ENST00000446987 GABRG2P18507 467 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 RAB3AP20336 220 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 CA5AP35218 305 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 LIPAP38571 399 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 GPR85P60893 370 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 MAB21L1Q13394 359 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 CAMK2GQ13555 558 aaPredicted RBP12.57□□□□□ -0.4
DDX56-206ENST00000446987 RCAN2Q14206 197 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 CAPRIN1Q14444 709 aaKnown RBP12.57□□□□□ -0.4
DDX56-206ENST00000446987 GRK1Q15835 563 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 ZNF528Q3MIS6 628 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 TIMM50Q3ZCQ8 353 aa12.57□□□□□ -0.4
DDX56-206ENST00000446987 FNDC3BQ53EP0 1204 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms