RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 GIMAP2Q9UG22 337 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CIDEBQ9UHD4 219 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 LEF1Q9UJU2 399 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CA5BQ9Y2D0 317 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 WDR37Q9Y2I8 494 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 PLEKHM1Q9Y4G2 1056 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 POLR3HQ9Y535 204 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 PCDHGA2Q9Y5H1 932 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 PCYT1BQ9Y5K3 369 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 ENTPD2Q9Y5L3 495 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 PTGDR2Q9Y5Y4 395 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CFAP20Q9Y6A4 193 aaKnown RBP3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 U3KQE9 123 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 THADAQ6YHU6 1953 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 CACNA1EQ15878 2313 aa3.81□□□□□ -1.8
HMGB1P37-201ENST00000439613 SNRNP200O75643 2136 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 PI4KAP42356 2102 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 MDC1Q14676 2089 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 EML5Q05BV3 1969 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 GNG14A0A1W2PPG7 69 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 A0A1W2PR77 199 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 FAM221BA6H8Z2 402 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 KRT87PA6NCN2 255 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 A6NCN8 305 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 OR52A4PA6NMU1 304 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 MAGEB17A8MXT2 336 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 H0Y8X5 98 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 TRIM38O00635 465 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 FBP2O00757 339 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 ANKRD28O15084 1053 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 PRICKLE3O43900 615 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 PRAMEF4O60810 478 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 FKBP6O75344 327 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 ERN1O75460 977 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 CLEC3AO75596 197 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 KCNH1O95259 989 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 ATE1O95260 518 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 ATP6V1G2O95670 118 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 CSF2P04141 144 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 CHRM5P08912 532 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 ANXA4P09525 319 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 NME1P15531 152 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 AMD1P17707 334 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 CD22P20273 847 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 AK4P27144 223 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 S100A3P33764 101 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 AHRP35869 848 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 HPCAL1P37235 193 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 TRPC1P48995 793 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 AFF3P51826 1226 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 NME5P56597 212 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 C21orf59P57076 290 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 ACTR3P61158 418 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 UFM1P61960 85 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 HNRNPKP61978 463 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 RPS13P62277 151 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 ZXDAP98168 799 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 REEP5Q00765 189 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 HMGCS1Q01581 520 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 TGM3Q08188 693 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 SIGLEC14Q08ET2 396 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 TRAP1Q12931 704 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 EIF2B5Q13144 721 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 DDX39BQ13838 428 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 NFYCQ13952 458 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 SIM2Q14190 667 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 PLCL1Q15111 1095 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 RBBP5Q15291 538 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 SF1Q15637 639 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 CCDC6Q16204 474 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 MAPKAPK3Q16644 382 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 PIGGQ5H8A4 983 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 TMEM31Q5JXX7 168 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 CATSPEREQ5SY80 951 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 TPRG1LQ5T0D9 272 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 CPTPQ5TA50 214 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 DEPDC1Q5TB30 811 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 ANXA8L1Q5VT79 327 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 PRAMEF9Q5VWM5 478 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 DUS1LQ6P1R4 473 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 AAGABQ6PD74 315 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 IKBIPQ70UQ0 350 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 R3HCC1LQ7Z5L2 792 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 TAF8Q7Z7C8 310 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 SLC9B2Q86UD5 537 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 CDH24Q86UP0 819 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 FAM129CQ86XR2 697 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 NRROSQ86YC3 692 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 SYT12Q8IV01 421 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 RIMKLAQ8IXN7 391 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 SLC22A18ASQ8N1D0 253 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 METTL4Q8N3J2 472 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 C2orf73Q8N5S3 287 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 NATD1Q8N6N6 113 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 FAM181AQ8N9Y4 354 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 LINC01555Q8NAE3 123 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 SRFBP1Q8NEF9 429 aaKnown RBP3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 FAM46DQ8NEK8 389 aa3.8□□□□□ -1.8
HMGB1P37-201ENST00000439613 TRPV3Q8NET8 790 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms