RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 MGAT4BQ9UQ53 548 aa11.13□□□□□ -0.63
PTCH1-208ENST00000430669 LRRC14BA6NHZ5 514 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 MAGEB3O15480 346 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 RCBTB2O95199 551 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 KLF8O95600 359 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 BCKDHAP12694 445 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 LRP8Q14114 963 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 KLHL17Q6TDP4 642 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 LAPTM4BQ86VI4 370 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 OR4E2Q8NGC2 313 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 KLHL6Q8WZ60 621 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 MSANTD3Q96H12 275 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 SDHAF3Q9NRP4 125 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 TAS2R7Q9NYW3 318 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 IGLON5A6NGN9 336 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 AK1P00568 194 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 SIM2Q14190 667 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 LGI4Q8N135 537 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 DTD2Q96FN9 168 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 EPYCQ99645 322 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 ARMC1Q9NVT9 282 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 PRKD3O94806 890 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 AGXTP21549 392 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 CRB2Q5IJ48 1285 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 SATL1Q86VE3 508 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 DNAJC15Q9Y5T4 150 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 C1orf226A1L170 272 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 C9J4A7 227 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 AREL1O15033 823 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 RETP07949 1114 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 TACSTD2P09758 323 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 ATXN1LP0C7T5 689 aaKnown RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 ELOAQ14241 798 aaKnown RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 NUP54Q7Z3B4 507 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 COMMD4Q9H0A8 199 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 A0A1W2PP55 124 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 BLACEA4D250 179 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 MID1O15344 667 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 RPS17P08708 135 aaKnown RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 F7P08709 466 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 RHCEP18577 417 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 ARF5P84085 180 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 DCP2Q8IU60 420 aaKnown RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 COX4I2Q96KJ9 171 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 NSUN5Q96P11 429 aaKnown RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 COL21A1Q96P44 957 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 RPF2Q9H7B2 306 aaKnown RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 Q9N2J8 555 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 MARCH5Q9NX47 278 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF8P17098 575 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 RAB28P51157 221 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 LBX1P52954 281 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 MAPK11Q15759 364 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 DECR1Q16698 335 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 FAAH2Q6GMR7 532 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 PEG10Q86TG7 708 aaKnown RBP11.12□□□□□ -0.63
PTCH1-208ENST00000430669 PDZD3Q86UT5 571 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 OR52E4Q8NGH9 312 aa11.12□□□□□ -0.63
PTCH1-208ENST00000430669 TCRBV21S2A2A0A5A6 115 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 B4DGG1 531 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 TLX3O43711 291 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-208ENST00000430669 KHDRBS3O75525 346 aaKnown RBP11.11□□□□□ -0.63
PTCH1-208ENST00000430669 KRT33AO76009 404 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 NR2C1P13056 603 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF12P17014 697 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 ANGPT1Q15389 498 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF550Q7Z398 422 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 ASPGQ86U10 573 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 TMEM130Q8N3G9 435 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 SUN3Q8TAQ9 357 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 THRSPQ92748 146 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 SGIP1Q9BQI5 828 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 EFCAB9A8MZ26 197 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 JUNP05412 331 aaKnown RBP11.11□□□□□ -0.63
PTCH1-208ENST00000430669 DBTP11182 482 aaKnown RBP11.11□□□□□ -0.63
PTCH1-208ENST00000430669 IL12RB1P42701 662 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 NADSYN1Q6IA69 706 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 LCTLQ6UWM7 567 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 TREML1Q86YW5 311 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 ISL2Q96A47 359 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 GBF1Q92538 1859 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 TRBC2A0A5B9 178 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 NPIPB15A6NHN6 443 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-208ENST00000430669 DENRO43583 198 aaKnown RBP11.11□□□□□ -0.63
PTCH1-208ENST00000430669 NADKO95544 446 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-208ENST00000430669 OXSR1O95747 527 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-208ENST00000430669 C6orf47O95873 294 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 RENP00797 406 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 BLVRAP53004 296 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 KLHL24Q6TFL4 600 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 CD180Q99467 661 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 PRODH2Q9UF12 536 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 HCN4Q9Y3Q4 1203 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 MT-ND1P03886 318 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 BMP8BP34820 402 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 ZNF852Q6ZMS4 543 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 BMP8AQ7Z5Y6 402 aa11.11□□□□□ -0.63
PTCH1-208ENST00000430669 MARVELD2Q8N4S9 558 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms