RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 KCNC2Q96PR1 638 aa16.31■□□□□ 0.2
CHEK1-202ENST00000427383 GPATCH1Q9BRR8 931 aaKnown RBP16.31■□□□□ 0.2
CHEK1-202ENST00000427383 CHRNA10Q9GZZ6 450 aa16.31■□□□□ 0.2
CHEK1-202ENST00000427383 WDR41Q9HAD4 459 aa16.31■□□□□ 0.2
CHEK1-202ENST00000427383 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
CHEK1-202ENST00000427383 PCDHGA7Q9Y5G6 932 aa16.31■□□□□ 0.2
CHEK1-202ENST00000427383 A0A088AWK7 358 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 EME2A4GXA9 379 aaPredicted RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SLC9B1P1A6NJY1 282 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 H0YGG7 62 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 ERI3O43414 337 aaKnown RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SCELO95171 688 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 ZNF883P0CG24 379 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 CD1CP29017 333 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 PLA2G16P53816 162 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 ARF3P61204 181 aaPredicted RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 STXBP1P61764 594 aaKnown RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SNRPNP63162 240 aaKnown RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 RGS1Q08116 209 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 ART3Q13508 389 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 TOR1AIP1Q5JTV8 583 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 OR4C11Q6IEV9 310 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 FAM71E1Q6IPT2 247 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 GUSBP11Q6P575 273 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SLC2A7Q6PXP3 512 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 CARFQ8N187 725 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 MINDY1Q8N5J2 469 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 AMER3Q8N944 861 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 KCT2Q8NC54 265 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 NCSTNQ92542 709 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 GFM2Q969S9 779 aaKnown RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 GAL3ST3Q96A11 431 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 ZDHHC12Q96GR4 267 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 TGM7Q96PF1 710 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 PRDM7Q9NQW5 492 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SEMA5BQ9P283 1151 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 MAPRE3Q9UPY8 281 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 NEUROG3Q9Y4Z2 214 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 UNC13CQ8NB66 2214 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 COL5A1P20908 1838 aaPredicted RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 IGHV5-51A0A0C4DH38 117 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 LNP1A1A4G5 178 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 AKAP10O43572 662 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 TMPRSS11DO60235 418 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SMIM10L1P0DMW3 83 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 HIST1H1TP22492 207 aaPredicted RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 PGM1P36871 562 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SSR2P43308 183 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 GSTM5P46439 218 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 GABRA4P48169 554 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 TAS2R50P59544 299 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 TRMT5Q32P41 509 aaKnown RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 CCNYL2Q5T2Q4 361 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 LAIR1Q6GTX8 287 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 WDR74Q6RFH5 385 aaPredicted RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 MSANTD1Q6ZTZ1 278 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 DNAJC22Q8N4W6 341 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 EID2Q8N6I1 236 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 CAMKVQ8NCB2 501 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 OR7A2PQ8NGA2 310 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 GTF2H4Q92759 462 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 MCUR1Q96AQ8 359 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 TCTN2Q96GX1 697 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SMIM10Q96HG1 83 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 QRFPRQ96P65 431 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 RAB3IPQ96QF0 476 aaPredicted RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 TBCDQ9BTW9 1192 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 GTPBP2Q9BX10 602 aaKnown RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SERHLQ9NQF3 203 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 PRPF19Q9UMS4 504 aaKnown RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 BTBD3Q9Y2F9 522 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
CHEK1-202ENST00000427383 RALGAPA1Q6GYQ0 2036 aa16.3■□□□□ 0.2
CHEK1-202ENST00000427383 KHNYNO15037 678 aaKnown RBP16.29■□□□□ 0.2
CHEK1-202ENST00000427383 CASC3O15234 703 aaKnown RBP16.29■□□□□ 0.2
CHEK1-202ENST00000427383 SCN2BO60939 215 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 NPPAP01160 153 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 FURINP09958 794 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 PIM1P11309 404 aaPredicted RBP16.29■□□□□ 0.2
CHEK1-202ENST00000427383 HPCAL1P37235 193 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 KIR3DL1P43629 444 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 MAPK12P53778 367 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 WNT3P56703 355 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 SRSF11Q05519 484 aaKnown RBP16.29■□□□□ 0.2
CHEK1-202ENST00000427383 SQSTM1Q13501 440 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 PROX2Q3B8N5 592 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 MANEAQ5SRI9 462 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 PERM1Q5SV97 790 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 MRM1Q6IN84 353 aaKnown RBP16.29■□□□□ 0.2
CHEK1-202ENST00000427383 TRIM40Q6P9F5 258 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 PGM2L1Q6PCE3 622 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 DLEU7Q6UYE1 221 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 DGLUCYQ7Z3D6 616 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 ULK2Q8IYT8 1036 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 TMEM132CQ8N3T6 1108 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 ZCCHC7Q8N3Z6 543 aaKnown RBP16.29■□□□□ 0.2
CHEK1-202ENST00000427383 ARHGEF39Q8N4T4 335 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 SRFBP1Q8NEF9 429 aaKnown RBP16.29■□□□□ 0.2
CHEK1-202ENST00000427383 CDC26Q8NHZ8 85 aa16.29■□□□□ 0.2
CHEK1-202ENST00000427383 UTP15Q8TED0 518 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms