RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PRAMEF10O60809 474 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 DNAJA2O60884 412 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 SEC22BO75396 215 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 IL6P05231 212 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 ADRB1P08588 477 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 G6PDP11413 515 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 CAPN3P20807 821 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 CDH3P22223 829 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 CCKBRP32239 447 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 CASP2P42575 452 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 UFM1P61960 85 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 TAP2Q03519 686 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 BNIP2Q12982 314 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 CSTF3Q12996 717 aaKnown RBP14.94□□□□□ -0.02
SHOX2-202ENST00000425436 CHIT1Q13231 466 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 KIR2DS3Q14952 304 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 ARHGAP19Q14CB8 494 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 RFTN2Q52LD8 501 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-202ENST00000425436 CAPN13Q6MZZ7 669 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-202ENST00000425436 SPESP1Q6UW49 350 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 ARHGAP22Q7Z5H3 698 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 LRRC56Q8IYG6 542 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-202ENST00000425436 DPP10Q8N608 796 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 PYCR2Q96C36 320 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 CMTM7Q96FZ5 175 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 RSRC1Q96IZ7 334 aaKnown RBP14.94□□□□□ -0.02
SHOX2-202ENST00000425436 C1orf50Q9BV19 199 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 TRIM15Q9C019 465 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 TWSG1Q9GZX9 223 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 AP3M1Q9Y2T2 418 aa14.94□□□□□ -0.02
SHOX2-202ENST00000425436 A0A1W2PNU3 283 aaPredicted RBP14.93□□□□□ -0.02
SHOX2-202ENST00000425436 SLC9B1P1A6NJY1 282 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 HSD17B1P14061 328 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 HSD17B2P37059 387 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 SESN3P58005 492 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 NAE1Q13564 534 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 NFYCQ13952 458 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 MUM1Q2TAK8 710 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 FRG2Q64ET8 278 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 RETREG3Q86VR2 466 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 CACTIN-AS1Q8N1I8 211 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 GOLM1Q8NBJ4 401 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 SMPDL3AQ92484 453 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 REPS1Q96D71 796 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 FRG2BQ96QU4 278 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 DPY30Q9C005 99 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 STRADBQ9C0K7 418 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 PCDHGA11Q9Y5H2 935 aa14.93□□□□□ -0.02
SHOX2-202ENST00000425436 MED19A0JLT2 244 aaPredicted RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 TLCD2A6NGC4 264 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 ZNF839A8K0R7 811 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 H0YIV9 168 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 PDYNP01213 254 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 ST6GAL1P15907 406 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 CLNS1AP54105 237 aaKnown RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 RPL38P63173 70 aaKnown RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 TLR1Q15399 786 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 SGO1Q5FBB7 561 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 C3orf38Q5JPI3 329 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 THEMIS2Q5TEJ8 643 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 IRAK1BP1Q5VVH5 260 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 KIAA1614Q5VZ46 1190 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 GRHL2Q6ISB3 625 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 RAB11FIP2Q7L804 512 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 PRSS42Q7Z5A4 293 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 DHDDSQ86SQ9 333 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 EFCAB3Q8N7B9 438 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 OR2A1Q8NGT9 310 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 PYDC1Q8WXC3 89 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 DNAJC9Q8WXX5 260 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 ZUFSPQ96AP4 578 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 SLC22A18Q96BI1 424 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 CD180Q99467 661 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 BRF2Q9HAW0 419 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 C1GALT1Q9NS00 363 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 OCIAD1Q9NX40 245 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 TAC3Q9UHF0 121 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 SATB2Q9UPW6 733 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 MAPRE3Q9UPY8 281 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 TMX2-CTNND1H3BSU7 103 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 ANKRD28O15084 1053 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 SORBS2O94875 1100 aaKnown RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 CCL4P13236 92 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 VARSP26640 1264 aaKnown RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 CSTF2P33240 577 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 ZFP36L2P47974 494 aaKnown RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 SLC7A2P52569 658 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 TBPL1P62380 186 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 MS4A2Q01362 244 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 TRA2AQ13595 282 aaKnown RBP eCLIP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 E2F2Q14209 437 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 KCNAB1Q14722 419 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 TAF11Q15544 211 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 SLC5A12Q1EHB4 618 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 XKR6Q5GH73 641 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 FAM129CQ86XR2 697 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 BHLHE22Q8NFJ8 381 aaPredicted RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 KLHL6Q8WZ60 621 aa14.92□□□□□ -0.02
SHOX2-202ENST00000425436 DUS3LQ96G46 650 aaKnown RBP14.92□□□□□ -0.02
SHOX2-202ENST00000425436 LRGUKQ96M69 825 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms