RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 CAPN1P07384 714 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 KRT7P08729 469 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 HOXB7P09629 217 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 THRAP10827 490 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 GFAPP14136 432 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 STMN1P16949 149 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PSMC3P17980 439 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ATF6P18850 670 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A6P19224 532 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A1P22309 533 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A4P22310 534 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 DGKAP23743 735 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 CHMP24386 653 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ACAT1P24752 427 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 CXCR2P25025 360 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 RPA1P27694 616 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 RRM2P31350 389 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A3P35503 534 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A5P35504 534 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PIK3CAP42336 1068 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLCO1A2P46721 670 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FASLGP48023 281 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC9A3P48764 834 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 RGS7P49802 495 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 DNA2P51530 1060 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 YWHAGP61981 247 aaKnown RBP eCLIP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PPARDQ03181 441 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 TEFQ10587 303 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SMARCB1Q12824 385 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 GRIK2Q13002 908 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 MRPL28Q13084 256 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 KRR1Q13601 381 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SELPLGQ14242 412 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 HERC3Q15034 1050 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 C2orf68Q2NKX9 166 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SMU1Q2TAY7 513 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 COL28A1Q2UY09 1125 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 EIF2S3LQ2VIR3 472 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZBED5Q49AG3 693 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 CCDC58Q4VC31 144 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SFT2D3Q587I9 215 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 KCNT1Q5JUK3 1230 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 DCST1Q5T197 706 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ARHGEF16Q5VV41 709 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FRG2Q64ET8 278 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 KRT80Q6KB66 452 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 QSOX2Q6ZRP7 698 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 C15orf52Q6ZUT6 534 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PRUNE1Q86TP1 453 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 HAPLN4Q86UW8 402 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 GPBP1Q86WP2 473 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UNC45BQ8IWX7 931 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PM20D2Q8IYS1 436 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC38A6Q8IZM9 456 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 TCAIMQ8N3R3 496 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 NATD1Q8N6N6 113 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 METTL13Q8N6R0 699 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ASCC1Q8N9N2 400 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 LMNTD1Q8N9Z9 388 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 KBTBD3Q8NAB2 608 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC4A11Q8NBS3 891 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 POC1AQ8NBT0 407 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PPHLN1Q8NEY8 458 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 OR10Z1Q8NGY1 313 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FBXO25Q8TCJ0 367 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 POMGNT1Q8WZA1 660 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ART4Q93070 314 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 CIDECQ96AQ7 238 aaPredicted RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 VPS33AQ96AX1 596 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ISOC1Q96CN7 298 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 NRBF2Q96F24 287 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 RRNAD1Q96FB5 475 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDCA5Q96FF9 252 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 RMND5BQ96G75 393 aaPredicted RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PANX3Q96QZ0 392 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 RANBP9Q96S59 729 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 KCNK16Q96T55 309 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 DOK1Q99704 481 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRIM51Q9BSJ1 452 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 NUP85Q9BW27 656 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ACAT2Q9BWD1 397 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 CALN1Q9BXU9 219 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 GCOM2Q9BZD3 368 aaPredicted RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 GLIS2Q9BZE0 524 aaPredicted RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SPRY4Q9C004 299 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 HOXD1Q9GZZ0 328 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 TKTL2Q9H0I9 626 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 WWP1Q9H0M0 922 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 KCNN2Q9H2S1 579 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 RAD21L1Q9H4I0 556 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FAM96AQ9H5X1 160 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ARMC7Q9H6L4 198 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 EVA1AQ9H8M9 152 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FKRPQ9H9S5 495 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SIAEQ9HAT2 523 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A7Q9HAW7 530 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A10Q9HAW8 530 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A8Q9HAW9 530 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SYTL2Q9HCH5 934 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FBRSL1Q9HCM7 1045 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms