RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 C16orf72Q14CZ0 275 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 NONOQ15233 471 aaKnown RBP eCLIP0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 NPTX1Q15818 432 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 SNX30Q5VWJ9 437 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 LIPJQ5W064 366 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 Q6ZVQ6 151 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 NUFIP2Q7Z417 695 aaKnown RBP0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 KRT77Q7Z794 578 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 LRP11Q86VZ4 500 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 CCDC60Q8IWA6 550 aaPredicted RBP0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 GPR137CQ8N3F9 429 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 CARNMT1Q8N4J0 409 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 ZNF491Q8N8L2 437 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 RASGEF1AQ8N9B8 481 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 BEST4Q8NFU0 473 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 PTPMT1Q8WUK0 201 aaPredicted RBP0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 JAKMIP2Q96AA8 810 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 NSUN4Q96CB9 384 aaKnown RBP0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 C16orf74Q96GX8 76 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 RCHY1Q96PM5 261 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 PAFAH2Q99487 392 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 NDNQ99608 321 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 BARD1Q99728 777 aaKnown RBP0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 ITPAQ9BY32 194 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 ACTL8Q9H568 366 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 FNDC4Q9H6D8 234 aaPredicted RBP0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 KIF26AQ9ULI4 1882 aaPredicted RBP0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 ASTN1O14525 1302 aa0.64□□□□□ -2.31
GTF3C3-203ENST00000416690 MYO10Q9HD67 2058 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 TDRD9Q8NDG6 1382 aaKnown RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 GPR75-ASB3A0A0A6YYF3 556 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 IGHV3-35A0A0C4DH35 117 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 A0A0U1RQK1 487 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 OR2A25A4D2G3 310 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 TCP10L2B9ZVM9 353 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 EEF2KO00418 725 aaKnown RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 SNAI2O43623 268 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 FRAT2O75474 233 aaPredicted RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 RPS6KA5O75582 802 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 ATP6AP2O75787 350 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 DNTTP04053 509 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 YES1P07947 543 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 SAGP10523 405 aaPredicted RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 CD59P13987 128 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 EPCAMP16422 314 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 TRIM21P19474 475 aaKnown RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 TM4SF1P30408 202 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 SFTPDP35247 375 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 HMGCLP35914 325 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 LHX1P48742 406 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 ZNF75DP51815 510 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 RIPPLY3P57055 190 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 PFN3P60673 137 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 OVGP1Q12889 678 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 BIRC2Q13490 618 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 FASTKQ14296 549 aaKnown RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 TAZQ16635 292 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 IGSF11Q5DX21 431 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 KRT39Q6A163 491 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 APOBEC3FQ8IUX4 373 aaKnown RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 GUF1Q8N442 669 aaKnown RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 C14orf178Q8N769 122 aaPredicted RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 LINC01555Q8NAE3 123 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 ZNRF1Q8ND25 227 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 C1orf131Q8NDD1 294 aaKnown RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 TBCKQ8TEA7 893 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 PCNPQ8WW12 178 aaKnown RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 ATL1Q8WXF7 558 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 LPGAT1Q92604 370 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 MOB3AQ96BX8 217 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 NTNG2Q96CW9 530 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 VSIG2Q96IQ7 327 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 FTOQ9C0B1 505 aaKnown RBP eCLIP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 LIME1Q9H400 295 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 OSGEPL1Q9H4B0 414 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 RNF121Q9H920 327 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 C3orf14Q9HBI5 128 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 CDH20Q9HBT6 801 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 SLC35C2Q9NQQ7 365 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 ZNF331Q9NQX6 463 aaPredicted RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 KLRF1Q9NZS2 232 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 RNF150Q9ULK6 438 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 FBXO7Q9Y3I1 522 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 RPS6KL1Q9Y6S9 549 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 RAI1Q7Z5J4 1906 aaPredicted RBP0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 PRDM2Q13029 1718 aa0.63□□□□□ -2.31
GTF3C3-203ENST00000416690 LOC102723996A0A087X1L8 192 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 TRAV24A0A0B4J272 114 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 FSD2A1L4K1 749 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 LMO7DNF2Z398 122 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 ADAMDEC1O15204 470 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 IPO8O15397 1037 aaKnown RBP0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 GPAA1O43292 621 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 HSPB1P04792 205 aaKnown RBP0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 DUTP33316 252 aaKnown RBP0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 MAGEA9P43362 315 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 P2RY4P51582 365 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 MAMLD1Q13495 774 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 IL17AQ16552 155 aa0.62□□□□□ -2.31
GTF3C3-203ENST00000416690 ARMCX4Q5H9R4 360 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms