RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 OR4A15Q8NGL6 344 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 OR52J3Q8NH60 311 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 GEMIN6Q8WXD5 167 aaKnown RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 MCCC1Q96RQ3 725 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 PIP5K1AQ99755 562 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 TMEM38AQ9H6F2 299 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 FTSJ1Q9UET6 329 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 NPIPB15A6NHN6 443 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 KPNA5O15131 536 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 ANXA4P09525 319 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 CKBP12277 381 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 SERPINA4P29622 427 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 XCR1P46094 333 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 MRPS15P82914 257 aaKnown RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 CDH18Q13634 790 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 ATP13A5Q4VNC0 1218 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 XKR6Q5GH73 641 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 ARMC4Q5T2S8 1044 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 GCNT6Q5T4J0 391 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 GRHL2Q6ISB3 625 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 TRIM69Q86WT6 500 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 VRK3Q8IV63 474 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 BBS7Q8IWZ6 715 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 OR9Q2Q8NGE9 314 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 WDR36Q8NI36 951 aaKnown RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 OPALINQ96PE5 141 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 FAM129BQ96TA1 746 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 ASPNQ9BXN1 380 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 BHLHE41Q9C0J9 482 aaPredicted RBP16.93■□□□□ 0.3
SDCBP-202ENST00000413219 ACER3Q9NUN7 267 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 TAS2R16Q9NYV7 291 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 V9GYH0 126 aa16.93■□□□□ 0.3
SDCBP-202ENST00000413219 IGSF6O95976 241 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 IFNA14P01570 189 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 OPN1SWP03999 348 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 TNFRSF1BP20333 461 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 CRATP43155 626 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 RFX2P48378 723 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 SCARB2Q14108 478 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 SPIN4Q56A73 249 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 ZDHHC20Q5W0Z9 365 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 TRAF7Q6Q0C0 670 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 TMPRSS11AQ6ZMR5 421 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 PTCHD4Q6ZW05 846 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 METTL3Q86U44 580 aaKnown RBP16.92■□□□□ 0.3
SDCBP-202ENST00000413219 C1orf52Q8N6N3 182 aaKnown RBP16.92■□□□□ 0.3
SDCBP-202ENST00000413219 OR52N2Q8NGI0 321 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 RASSF5Q8WWW0 418 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 ASB15Q8WXK1 588 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 PHOX2BQ99453 314 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 MTERF1Q99551 399 aaKnown RBP16.92■□□□□ 0.3
SDCBP-202ENST00000413219 ROGDIQ9GZN7 287 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 ATG10Q9H0Y0 220 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 SEC14L4Q9UDX3 406 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 ATP6V1HQ9UI12 483 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 MGAT4DA6NG13 374 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 PRAMEF25A6NGN4 478 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 ADRA2AP08913 450 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 RORCP51449 518 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 CRISP1P54107 249 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 DOC2AQ14183 400 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 CRB2Q5IJ48 1285 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 MEDAGQ5VYS4 303 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 CCSAPQ6IQ19 270 aaPredicted RBP16.92■□□□□ 0.3
SDCBP-202ENST00000413219 KLHDC8AQ8IYD2 350 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 WFDC5Q8TCV5 224 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 CLP1Q92989 425 aaKnown RBP16.92■□□□□ 0.3
SDCBP-202ENST00000413219 ASIC4Q96FT7 647 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 TCF25Q9BQ70 676 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 HHATLQ9HCP6 504 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 FZD3Q9NPG1 666 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 GPATCH2Q9NW75 528 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 LSM2Q9Y333 95 aaKnown RBP16.92■□□□□ 0.3
SDCBP-202ENST00000413219 PPIL1Q9Y3C6 166 aa16.92■□□□□ 0.3
SDCBP-202ENST00000413219 SRPRAP08240 638 aaKnown RBP16.91■□□□□ 0.3
SDCBP-202ENST00000413219 ETFAP13804 333 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 GKP32189 559 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 CSTF2P33240 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
SDCBP-202ENST00000413219 OR1E2P47887 323 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 DDX39BQ13838 428 aaKnown RBP16.91■□□□□ 0.3
SDCBP-202ENST00000413219 FRMPD2BQ6IN97 320 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 SLC8B1Q6J4K2 584 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 PRSS55Q6UWB4 352 aaPredicted RBP16.91■□□□□ 0.3
SDCBP-202ENST00000413219 THOC6Q86W42 341 aaKnown RBP16.91■□□□□ 0.3
SDCBP-202ENST00000413219 GALNT12Q8IXK2 581 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 FAM181AQ8N9Y4 354 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 FAM46DQ8NEK8 389 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 ELMO1Q92556 727 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 SCRN2Q96FV2 425 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 NEDD4LQ96PU5 975 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 DEPDC7Q96QD5 511 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 BBS2Q9BXC9 721 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 ELAC1Q9H777 363 aaKnown RBP16.91■□□□□ 0.3
SDCBP-202ENST00000413219 SLC25A19Q9HC21 320 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 ENPP4Q9Y6X5 453 aa16.91■□□□□ 0.3
SDCBP-202ENST00000413219 IQCMA0A1B0GVH7 501 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 A8MX80 341 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 M0R129 80 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 PCDH17O14917 1159 aa16.9■□□□□ 0.3
SDCBP-202ENST00000413219 GUCY1B2O75343 617 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms