RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 HSH2DQ96JZ2 352 aa19.3■□□□□ 0.68
SUMO3-204ENST00000411651 C12orf66Q96MD2 445 aa19.3■□□□□ 0.68
SUMO3-204ENST00000411651 MBOAT4Q96T53 435 aa19.3■□□□□ 0.68
SUMO3-204ENST00000411651 INSM2Q96T92 566 aaPredicted RBP19.3■□□□□ 0.68
SUMO3-204ENST00000411651 TRIM4Q9C037 500 aa19.3■□□□□ 0.68
SUMO3-204ENST00000411651 MAGED1Q9Y5V3 778 aaPredicted RBP19.3■□□□□ 0.68
SUMO3-204ENST00000411651 RFXAPO00287 272 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 CACNB4O00305 520 aaPredicted RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 CLEC3AO75596 197 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 CLIC3O95833 236 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 C6orf47O95873 294 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 IL3P08700 152 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 BSGP35613 385 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 IST1P53990 364 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 ABATP80404 500 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 PRDX1Q06830 199 aaKnown RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 HTR4Q13639 388 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 GCNT6Q5T4J0 391 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 KIAA1211LQ6NV74 962 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 TMEM26Q6ZUK4 368 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 DCP2Q8IU60 420 aaKnown RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 ANKRD53Q8N9V6 530 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 LMNTD1Q8N9Z9 388 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 DENND6BQ8NEG7 585 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 CAMK1GQ96NX5 476 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 FERD3LQ96RJ6 166 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 DPH2Q9BQC3 489 aaPredicted RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 SLC35A5Q9BS91 424 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 APOOQ9BUR5 198 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 MIEF1Q9NQG6 463 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 LMCD1Q9NZU5 365 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 SPASTQ9UBP0 616 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 WDR37Q9Y2I8 494 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 SUV39H1O43463 412 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 C1QCP02747 245 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 FUCA1P04066 466 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 CTHP32929 405 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 CDK9P50750 372 aaKnown RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 KIAA1024LP59773 190 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 HEPACAMQ14CZ8 416 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 MLF2Q15773 248 aaPredicted RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 ZNF630Q2M218 657 aaPredicted RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 UAP1L1Q3KQV9 507 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 TMEM179BQ7Z7N9 219 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 NUDT13Q86X67 352 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 IL17RCQ8NAC3 791 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 LINC01555Q8NAE3 123 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 NECTIN4Q96NY8 510 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 DOHHQ9BU89 302 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 SARGQ9BW04 601 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 ACAT2Q9BWD1 397 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 SMURF2Q9HAU4 748 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 GPATCH2Q9NW75 528 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 CUEDC1Q9NWM3 386 aaPredicted RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 TMEFF2Q9UIK5 374 aaPredicted RBP19.29■□□□□ 0.68
SUMO3-204ENST00000411651 HEBP2Q9Y5Z4 205 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 HSPE1-MOB4S4R3N1 261 aa19.29■□□□□ 0.68
SUMO3-204ENST00000411651 A0A1W2PQF6 199 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 A0A1W2PRB8 838 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 SAP18O00422 153 aaKnown RBP19.28■□□□□ 0.68
SUMO3-204ENST00000411651 RPL10P27635 214 aaKnown RBP19.28■□□□□ 0.68
SUMO3-204ENST00000411651 RYKP34925 604 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 SEC13P55735 322 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 GABARAPL2P60520 117 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 KCNAB2Q13303 367 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 TOP3AQ13472 1001 aaPredicted RBP19.28■□□□□ 0.68
SUMO3-204ENST00000411651 ZBED5Q49AG3 693 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 IQCCQ4KMZ1 466 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.28■□□□□ 0.683e-6■■■■■ 28.6
SUMO3-204ENST00000411651 ZC3H7AQ8IWR0 971 aaKnown RBP19.28■□□□□ 0.68
SUMO3-204ENST00000411651 NAGSQ8N159 534 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 GANCQ8TET4 914 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 ERLEC1Q96DZ1 483 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 CNDP2Q96KP4 475 aaKnown RBP19.28■□□□□ 0.68
SUMO3-204ENST00000411651 C7orf34Q96L11 122 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 TUBA1CQ9BQE3 449 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 AMBRA1Q9C0C7 1298 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 ING2Q9H160 280 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 NEUROD4Q9HD90 331 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 C1GALT1Q9NS00 363 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 RSL24D1Q9UHA3 163 aaKnown RBP19.28■□□□□ 0.68
SUMO3-204ENST00000411651 ABCG2Q9UNQ0 655 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 CFAP20Q9Y6A4 193 aaKnown RBP19.28■□□□□ 0.68
SUMO3-204ENST00000411651 TICRRQ7Z2Z1 1910 aa19.28■□□□□ 0.68
SUMO3-204ENST00000411651 TRBC2A0A5B9 178 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 SEC24DO94855 1032 aaPredicted RBP19.27■□□□□ 0.68
SUMO3-204ENST00000411651 HOXB2P14652 356 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 UQCRC2P22695 453 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 FRKP42685 505 aaPredicted RBP19.27■□□□□ 0.68
SUMO3-204ENST00000411651 MAPK12P53778 367 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 SELENOWP63302 87 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 CSNK1G2P78368 415 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 VLDLRP98155 873 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 MC1RQ01726 317 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 ZIK1Q3SY52 487 aaPredicted RBP19.27■□□□□ 0.68
SUMO3-204ENST00000411651 TMEM35AQ53FP2 167 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 OR5P2Q8WZ92 322 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 RGMAQ96B86 450 aa19.27■□□□□ 0.68
SUMO3-204ENST00000411651 EPYCQ99645 322 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms