RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 IKZF5Q9H5V7 419 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 HEBP1Q9NRV9 189 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 ZNF282Q9UDV7 671 aaPredicted RBP12.98□□□□□ -0.33
SIRPA-203ENST00000400068 TRBC2A0A5B9 178 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 FADS2P1A8MWK0 482 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 PDPK1O15530 556 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 NDUFS4O43181 175 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 UGT2B11O75310 529 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 RPL3P39023 403 aaKnown RBP12.98□□□□□ -0.33
SIRPA-203ENST00000400068 CENPAP49450 140 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 TIAL1Q01085 375 aaKnown RBP eCLIP12.98□□□□□ -0.33
SIRPA-203ENST00000400068 PMS2P3Q13401 168 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 SMU1Q2TAY7 513 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 ZBED5Q49AG3 693 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 SPIN4Q56A73 249 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 TBPL2Q6SJ96 375 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 ANKRD33Q7Z3H0 272 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 GOLM1Q8NBJ4 401 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 HMGB4Q8WW32 186 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 ZNF597Q96LX8 424 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 DOCK6Q96HP0 2047 aa12.98□□□□□ -0.33
SIRPA-203ENST00000400068 WDR90Q96KV7 1748 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 ZSCAN5BA6NJL1 495 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 H7C0S8 307 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 ITGA2P17301 1181 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 NCBP2P52298 156 aaKnown RBP eCLIP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 CMPK2Q5EBM0 449 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 ARMC8Q8IUR7 673 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 WDR48Q8TAF3 677 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 ZNF480Q8WV37 535 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 SMARCD2Q92925 531 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 NXPE3Q969Y0 559 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 BRINP2Q9C0B6 783 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 MBD1Q9UIS9 605 aaPredicted RBP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 NDUFS2O75306 463 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 TIA1P31483 386 aaKnown RBP eCLIP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 SEPHS1P49903 392 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 ANXA11P50995 505 aaKnown RBP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 TGM3Q08188 693 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 TOP3AQ13472 1001 aaPredicted RBP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 LIPJQ5W064 366 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 DEFB119Q8N690 84 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 TFAP2CQ92754 450 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 ZNF514Q96K75 400 aaPredicted RBP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 MRPS30Q9NP92 439 aaKnown RBP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 TM7SF3Q9NS93 570 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 FAM120CQ9NX05 1096 aaKnown RBP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 SARDHQ9UL12 918 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 PSME2Q9UL46 239 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 HTR3EA5X5Y0 456 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 CDK9P50750 372 aaKnown RBP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 CCR8P51685 355 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 SP140Q13342 867 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 TMEM126BQ8IUX1 230 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 COPS4Q9BT78 406 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 NTMT1Q9BV86 223 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 MRPL39Q9NYK5 338 aaKnown RBP12.97□□□□□ -0.33
SIRPA-203ENST00000400068 SBF1O95248 1867 aa12.97□□□□□ -0.33
SIRPA-203ENST00000400068 PIPSLA2A3N6 862 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 GMFGO60234 142 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 AP2A2O94973 939 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 MPC1LP0DKB6 136 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 AMD1P17707 334 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 HRH2P25021 359 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 DNAJA1P31689 397 aaKnown RBP12.96□□□□□ -0.33
SIRPA-203ENST00000400068 CCR4P51679 360 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 LASP1Q14847 261 aaKnown RBP12.96□□□□□ -0.33
SIRPA-203ENST00000400068 DGUOKQ16854 277 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 SLC22A8Q8TCC7 542 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 ART5Q96L15 291 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 ZNF696Q9H7X3 374 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 MARCH7Q9H992 704 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 TRPV5Q9NQA5 729 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 SPACA6W5XKT8 324 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 SERPINB7O75635 380 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 CXCL10P02778 98 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 CCDC103Q8IW40 242 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 TERB1Q8NA31 727 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 WDR36Q8NI36 951 aaKnown RBP12.96□□□□□ -0.33
SIRPA-203ENST00000400068 SPPL3Q8TCT6 385 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 PDLIM5Q96HC4 596 aaKnown RBP12.96□□□□□ -0.33
SIRPA-203ENST00000400068 ZNF607Q96SK3 696 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 NAA50Q9GZZ1 169 aaKnown RBP12.96□□□□□ -0.33
SIRPA-203ENST00000400068 REEP4Q9H6H4 257 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 FAM118AQ9NWS6 357 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 SLC27A6Q9Y2P4 619 aa12.96□□□□□ -0.33
SIRPA-203ENST00000400068 GABRR3A8MPY1 467 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 APOL3O95236 402 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 RYKP34925 604 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 PTPN5P54829 565 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 DSTNP60981 165 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 ATG9BQ674R7 924 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 SIPA1Q96FS4 1042 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 PLGRKTQ9HBL7 147 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 ADAP2Q9NPF8 381 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 GPC6Q9Y625 555 aaPredicted RBP12.96□□□□□ -0.34
SIRPA-203ENST00000400068 ZNF780BQ9Y6R6 833 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 NUAK1O60285 661 aa12.96□□□□□ -0.34
SIRPA-203ENST00000400068 SERPINB1P30740 379 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms