RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 BCKDKO14874 412 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ATG13O75143 517 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 VPS4BO75351 444 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 PRSS23O95084 383 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 PDYNP01213 254 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 C1QBP02746 253 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 RAP2AP10114 183 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ACADMP11310 421 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 EPB42P16452 691 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 EPHA2P29317 976 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 FMO3P31513 532 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 AKT1P31749 480 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CD70P32970 193 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 TGFBR2P37173 567 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CTSKP43235 329 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 EEFSECP57772 596 aaKnown RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 SNRPD2P62316 118 aaKnown RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 TEKQ02763 1124 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CACNG1Q06432 222 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CYP4F3Q08477 520 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 SMN1Q16637 294 aaKnown RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 TRIM60Q495X7 471 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 OR4F3Q6IEY1 312 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 SERPINA13PQ6UXR4 307 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 DNAJB7Q7Z6W7 309 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 VTCN1Q7Z7D3 282 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 VRK3Q8IV63 474 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 PHC2Q8IXK0 858 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 RIMKLAQ8IXN7 391 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CMTM8Q8IZV2 173 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 SVOPLQ8N434 492 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 YIPF7Q8N8F6 280 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZNF540Q8NDQ6 660 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 OR4M2Q8NGB6 313 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 FCGR1BQ92637 280 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 AKAP1Q92667 903 aaKnown RBP eCLIP4.84□□□□□ -1.634e-13■□□□□ 8.6
SSR1-202ENST00000397511 SCAMP4Q969E2 229 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 MARC2Q969Z3 335 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 TRNT1Q96Q11 434 aaKnown RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZBTB18Q99592 522 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 USB1Q9BQ65 265 aaKnown RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 SLC30A2Q9BRI3 323 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CDADC1Q9BWV3 514 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 VN1R3Q9BXE9 311 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ITPAQ9BY32 194 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 SLC22A4Q9H015 551 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.84□□□□□ -1.632e-9■■■■■ 37.6
SSR1-202ENST00000397511 FAM83DQ9H4H8 585 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 RIBC2Q9H4K1 309 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 MTG2Q9H4K7 406 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 DUSP21Q9H596 190 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZDHHC6Q9H6R6 413 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 LRTM1Q9HBL6 345 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 POPDC3Q9HBV1 291 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 POLMQ9NP87 494 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 ING3Q9NXR8 418 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 GPRC5BQ9NZH0 403 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 LHX3Q9UBR4 397 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 FBXO10Q9UK96 956 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 TRAPPC4Q9Y296 219 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZNF451Q9Y4E5 1061 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 PCM1Q15154 2024 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 ELOVL7A1L3X0 281 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 UPK1AO00322 258 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 AKR7A2O43488 359 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 RGS14O43566 566 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 TSC22D2O75157 780 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 TRIM3O75382 744 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 SLC22A5O76082 557 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 WDR47O94967 919 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 IGHA2P01877 340 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZDHHC11BP0C7U3 371 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CCNYL3P0C7X3 344 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ADORA3P0DMS8 318 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 BCKDHAP12694 445 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 JUNDP17535 347 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 POU3F3P20264 500 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 MYL9P24844 172 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 PSMA3P25788 255 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 EVI2BP34910 448 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 MASP1P48740 699 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 RGS4P49798 205 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 SLC35A2P78381 396 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 S100A12P80511 92 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 PWP1Q13610 501 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZXDCQ2QGD7 858 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 RFX4Q33E94 735 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ATP13A5Q4VNC0 1218 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 COQ5Q5HYK3 327 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZBTB37Q5TC79 503 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 LRRC66Q68CR7 880 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 BRAT1Q6PJG6 821 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 DOK6Q6PKX4 331 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 ZNF621Q6ZSS3 439 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 C16orf62Q7Z3J2 963 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 METTL3Q86U44 580 aaKnown RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 CCDC190Q86UF4 302 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 BBS7Q8IWZ6 715 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 MSRB3Q8IXL7 192 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms