RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZNF576Q9H609 170 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 ADAP2Q9NPF8 381 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 SEC14L3Q9UDX4 400 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 SNX11Q9Y5W9 270 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC5A10A0PJK1 596 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 SOX14O95416 240 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 MAGP20916 626 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 KDELR2P33947 212 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 RAB30Q15771 203 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 VMACQ2NL98 169 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 COX20Q5RI15 118 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 SLCO4C1Q6ZQN7 724 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 ZUFSPQ96AP4 578 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 HHIPQ96QV1 700 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 RPS6KA6Q9UK32 745 aa15.24■□□□□ 0.03
SMARCD1-202ENST00000394963 PCM1Q15154 2024 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 GGT1P19440 569 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 CAPGP40121 348 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 SCARB2Q14108 478 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 TMEM196Q5HYL7 178 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 GCNT6Q5T4J0 391 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 PYURFQ96I23 114 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 FANCEQ9HB96 536 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 SOHLH2Q9NX45 425 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 ABCG2Q9UNQ0 655 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 PCDHB3Q9Y5E6 796 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 A0A087WXM4 84 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 AREL1O15033 823 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 C8BP07358 591 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 TNNI3P19429 210 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 ABHD18Q0P651 414 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 HEPACAMQ14CZ8 416 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 SPIN4Q56A73 249 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 AHSA2Q719I0 299 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 R3HCC1LQ7Z5L2 792 aaKnown RBP15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 TMIEQ8NEW7 156 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 OR2L2Q8NH16 312 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC6A16Q9GZN6 736 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 REEP4Q9H6H4 257 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 IL21RQ9HBE5 538 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 THAP10Q9P2Z0 257 aaPredicted RBP15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 LRRC72A6NJI9 287 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 TNFRSF11BO00300 401 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 FADS2O95864 444 aaKnown RBP15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 LINC00271P0C7V0 271 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 C5AR1P21730 350 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC19A1P41440 591 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 NR1H2P55055 460 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 SFSWAPQ12872 951 aaKnown RBP15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 ARMC3Q5W041 872 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 KCTD8Q6ZWB6 473 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 SFTPA2Q8IWL1 248 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 FAM81AQ8TBF8 368 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 C16orf78Q8WTQ4 265 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 DNAJA3Q96EY1 480 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 GPATCH1Q9BRR8 931 aaKnown RBP15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 ZDHHC5Q9C0B5 715 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 DNAJB9Q9UBS3 223 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 TMCC3Q9ULS5 477 aa15.23■□□□□ 0.03
SMARCD1-202ENST00000394963 RIF1Q5UIP0 2472 aaKnown RBP15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 TCF3P15923 654 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 PTX3P26022 381 aaPredicted RBP15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 CTHP32929 405 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 ARL4DP49703 201 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 AMZ1Q400G9 498 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 RUNDC3AQ59EK9 446 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 GRHL2Q6ISB3 625 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 ETFBKMTQ8IXQ9 262 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 DKK3Q9UBP4 350 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 TOR1BO14657 336 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 BCKDKO14874 412 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 VEGFDO43915 354 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 PSIP1O75475 530 aaKnown RBP15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 PFKLP17858 780 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 IL1RNP18510 177 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 CDH2P19022 906 aaPredicted RBP15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 NTSP30990 170 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 RYKP34925 604 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 CDK6Q00534 326 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 FOXM1Q08050 763 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 NNATQ16517 81 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 SLC5A12Q1EHB4 618 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 OR52E8Q6IFG1 317 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 HACD2Q6Y1H2 254 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 TRIM46Q7Z4K8 759 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 OR52E1Q8NGJ3 308 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 SCN3BQ9NY72 215 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 A0A096LPI6 279 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 LOC100506127A0A0U1RQW1 187 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 OR6C74A6NCV1 312 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 SCAMP2O15127 329 aaKnown RBP15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 PDPK1O15530 556 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 FRS3O43559 492 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 UMPSP11172 480 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 AGXTP21549 392 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 DRD3P35462 400 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 CTBSQ01459 385 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 CYBRD1Q53TN4 286 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 TOR1AIP1Q5JTV8 583 aa15.22■□□□□ 0.03
SMARCD1-202ENST00000394963 UGT2A3Q6UWM9 527 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms