RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 GPR83Q9NYM4 423 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 MARK1Q9P0L2 795 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 IL36AQ9UHA7 158 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 RPS6KA6Q9UK32 745 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 RUVBL1Q9Y265 456 aaKnown RBP12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 AP3M1Q9Y2T2 418 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 PRKAB1Q9Y478 270 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 MAP4K5Q9Y4K4 846 aa12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 PCYT1BQ9Y5K3 369 aaPredicted RBP12.95□□□□□ -0.34
GTF2F1-201ENST00000394456 NUP210Q8TEM1 1887 aaPredicted RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 OTOL1A6NHN0 477 aaPredicted RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 PSIP1O75475 530 aaKnown RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 CDH3P22223 829 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 AP1S2P56377 157 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 UBE3AQ05086 875 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 GANABQ14697 944 aaKnown RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 CDKL4Q5MAI5 379 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 HENMT1Q5T8I9 393 aaKnown RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 TMEM220Q6QAJ8 160 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 UBE2Q1Q7Z7E8 422 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 ADCK1Q86TW2 530 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 SFTPA1Q8IWL2 248 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 NFKBIDQ8NI38 313 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 PHOSPHO2Q8TCD6 241 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 NXPE3Q969Y0 559 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 LGALS12Q96DT0 336 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 IL17FQ96PD4 163 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 ZDHHC4Q9NPG8 344 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 FAM120CQ9NX05 1096 aaKnown RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 SCN3BQ9NY72 215 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 PLAGL1Q9UM63 463 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 LYVE1Q9Y5Y7 322 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 ATG2AQ2TAZ0 1938 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 OR2A25A4D2G3 310 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 KPNA3O00505 521 aaPredicted RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 SUV39H1O43463 412 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 C9P02748 559 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 CYP2A6P11509 494 aaPredicted RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC6A11P48066 632 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 CDH12P55289 794 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 CSTF3Q12996 717 aaKnown RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 OXA1LQ15070 435 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 LIPJQ5W064 366 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 CELF5Q8N6W0 485 aaKnown RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF480Q8WV37 535 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 SLIRPQ9GZT3 109 aaKnown RBP12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 KLHL42Q9P2K6 505 aa12.94□□□□□ -0.34
GTF2F1-201ENST00000394456 ATG2BQ96BY7 2078 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 MGAT4DA6NG13 374 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 PRRT4C9JH25 899 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF197O14709 1029 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 PCDH17O14917 1159 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 CISD3P0C7P0 127 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 PORP16435 677 aaPredicted RBP12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 GADD45AP24522 165 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 RPS26P62854 115 aaKnown RBP12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 COL9A2Q14055 689 aaPredicted RBP12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF846Q147U1 533 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 STARD3Q14849 445 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 EXOC3L2Q2M3D2 409 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 GRHL2Q6ISB3 625 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 TSPYL5Q86VY4 417 aaPredicted RBP12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF557Q8N988 423 aaPredicted RBP12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 OR6Q1Q8NGQ2 317 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 CHTF18Q8WVB6 975 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 TMEM159Q96B96 161 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 OTUB2Q96DC9 234 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 SIGLEC11Q96RL6 698 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 RSPO3Q9BXY4 272 aaPredicted RBP12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 ASPSCR1Q9BZE9 553 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 RWDD3Q9Y3V2 267 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 NPIPB8E9PQR5 432 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 C5orf67F2Z3F1 127 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 TNFRSF11BO00300 401 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC9A3R1O14745 358 aaPredicted RBP12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 STSP08842 583 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 SLC13A2Q13183 592 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 SP140Q13342 867 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 TP53BP2Q13625 1128 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 SLCO4C1Q6ZQN7 724 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 RTL10Q7L3V2 364 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 SYTL1Q8IYJ3 562 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 CADM3Q8N126 398 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 VN1R2Q8NFZ6 395 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 COPS4Q9BT78 406 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 ACAT2Q9BWD1 397 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 TMEM165Q9HC07 324 aa12.93□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF30P17039 623 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 TPP2P29144 1249 aaPredicted RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 ST13P50502 369 aaKnown RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 TBPL1P62380 186 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 SPIBQ01892 262 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 TMEM115Q12893 351 aaPredicted RBP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 GPM6BQ13491 265 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 SLBPQ14493 270 aaKnown RBP eCLIP12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 UAP1L1Q3KQV9 507 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 ZNF805Q5CZA5 627 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 C9orf50Q5SZB4 431 aa12.92□□□□□ -0.34
GTF2F1-201ENST00000394456 ZDHHC20Q5W0Z9 365 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms