RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 CRHBPP24387 322 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 C21orf33P30042 268 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 SLC6A4P31645 630 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 EMX1Q04741 257 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 GPR68Q15743 365 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 TPGS2Q68CL5 300 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 NAGSQ8N159 534 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 PGBD5Q8N414 524 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 TMEM145Q8NBT3 493 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 RERGQ96A58 199 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 GPR78Q96P69 363 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 MTG2Q9H4K7 406 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 POLR1DQ9Y2S0 133 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 DAPL1A0PJW8 107 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 M0QZQ0 153 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 TPD52L2O43399 206 aaKnown RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 CHST10O43529 356 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 CAPN15O75808 1086 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 TYRP14679 529 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 CELP19835 753 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 PGFP49763 221 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 BNC1Q01954 994 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 LGALS3BPQ08380 585 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 HNRNPA0Q13151 305 aaKnown RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 GINS1Q14691 196 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 HLA-DQA1Q5Y7H0 255 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 RNF111Q6ZNA4 994 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 Q6ZPB1 254 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 ZFP41Q8N8Y5 198 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 CHDHQ8NE62 594 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 SH3YL1Q96HL8 342 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 SPACA7Q96KW9 195 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 MAPKAP1Q9BPZ7 522 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 IFT27Q9BW83 186 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 REEP4Q9H6H4 257 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 CERS4Q9HA82 394 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 BRWD1Q9NSI6 2320 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 PCDHB11Q9Y5F2 797 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 DNMT3AQ9Y6K1 912 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 COL4A1P02462 1669 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 LRRC72A6NJI9 287 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 SEMA3DO95025 777 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 FCER2P06734 321 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 KELP23276 732 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 STAT5AP42229 794 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 SEMA3BQ13214 749 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 SLC9A5Q14940 896 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 ZNF630Q2M218 657 aaPredicted RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 REEP3Q6NUK4 255 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 TUBA3EQ6PEY2 450 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 Q6ZSR9 355 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 BEND5Q7L4P6 421 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 LHFPL3Q86UP9 236 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 ZSWIM9Q86XI8 627 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 RHBDF1Q96CC6 855 aa12.5□□□□□ -0.41
PCNX4-202ENST00000391611 ELAC1Q9H777 363 aaKnown RBP12.5□□□□□ -0.41
PCNX4-202ENST00000391611 ADAMTSL3P82987 1691 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TLL1O43897 1013 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 SCN2BO60939 215 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 LEFTY1O75610 366 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 DCDC1P59894 354 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TBRG1Q3YBR2 411 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 NCEH1Q6PIU2 408 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TSPYL5Q86VY4 417 aaPredicted RBP12.49□□□□□ -0.41
PCNX4-202ENST00000391611 FAM46DQ8NEK8 389 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 OR9Q2Q8NGE9 314 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 LCN9Q8WX39 176 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 GTF2H4Q92759 462 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 ZSCAN5AQ9BUG6 496 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TSSK6Q9BXA6 273 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TTTY10Q9BZA0 68 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TUBB1Q9H4B7 451 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 NEK6Q9HC98 313 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 HSPB11Q9Y547 144 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 INSL5Q9Y5Q6 135 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 IRGMA1A4Y4 181 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 CACNB4O00305 520 aaPredicted RBP12.49□□□□□ -0.41
PCNX4-202ENST00000391611 HIST1H2ABP04908 130 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 PCSK2P16519 638 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 PFKLP17858 780 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TACR1P25103 407 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 ITPKBP27987 946 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 PPP5CP53041 499 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 PNLIPRP1P54315 467 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 PPP2R2BQ00005 443 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 UGT8Q16880 541 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 BRAT1Q6PJG6 821 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 HIST3H2AQ7L7L0 130 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TMCO2Q7Z6W1 182 aaPredicted RBP12.49□□□□□ -0.41
PCNX4-202ENST00000391611 NUDT13Q86X67 352 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TRPV1Q8NER1 839 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 OR2T11Q8NH01 316 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 HUS1BQ8NHY5 278 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 DOK4Q8TEW6 326 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 HIST1H2ACQ93077 130 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 TAS2R9Q9NYW1 312 aa12.49□□□□□ -0.41
PCNX4-202ENST00000391611 C5AR2Q9P296 337 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms