RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 C1QCP02747 245 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ATXN1LP0C7T5 689 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 DSC2Q02487 901 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 MXD1Q05195 221 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 C18orf21Q32NC0 220 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 CLLU1Q5K131 121 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 CLVS2Q5SYC1 327 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ARTNQ5T4W7 220 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 AFMIDQ63HM1 303 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 PLAG1Q6DJT9 500 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 CBLL1Q75N03 491 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 GOLGA7Q7Z5G4 137 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ABI3BPQ7Z7G0 1075 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ANKRD46Q86W74 232 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 C7orf57Q8NEG2 295 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 VPS37AQ8NEZ2 397 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 OR13C4Q8NGS5 318 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ZNF431Q8TF32 576 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 HERVK_113Q902F9 699 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 FBXW5Q969U6 566 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 DACT3Q96B18 629 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 KLHL15Q96M94 604 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 CNOT2Q9NZN8 540 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ZMYM5Q9UJ78 669 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 SGTAO43765 313 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ORC5O43913 435 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 HCN1O60741 890 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 RRASP10301 218 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 MAD2L1Q13257 205 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 SERPINA11Q86U17 422 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC44A2Q8IWA5 706 aaPredicted RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC5A8Q8N695 610 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ANKRD53Q8N9V6 530 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 OR7D4Q8NG98 312 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 UTP15Q8TED0 518 aaKnown RBP14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 SORCS2Q96PQ0 1159 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 WASH6PQ9NQA3 447 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 OGDHLQ9ULD0 1010 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 DUSP12Q9UNI6 340 aa14.11□□□□□ -0.15
VPS9D1-201ENST00000389386 ARPC4-TTLL3A0A0A6YYG9 625 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 RGS14O43566 566 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 PI15O43692 258 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 ADAMTS4O75173 837 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 CDRT1O95170 752 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 PSMA1P25786 263 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 HOXC13P31276 330 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 BMP8BP34820 402 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 CBX5P45973 191 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 CLCNKAP51800 687 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 HMGCS1Q01581 520 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 ZMYND11Q15326 602 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 VMACQ2NL98 169 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 PDE12Q6L8Q7 609 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 LIPIQ6XZB0 460 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 BMP8AQ7Z5Y6 402 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 C19orf18Q8NEA5 215 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 ATP6V1C2Q8NEY4 427 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 PCNPQ8WW12 178 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 KLHL6Q8WZ60 621 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 IMPAD1Q9NX62 359 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 MGAT4AQ9UM21 535 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 STUB1Q9UNE7 303 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 LSM2Q9Y333 95 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 Q9Y3F1 56 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 DNMT3AQ9Y6K1 912 aaPredicted RBP14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 HYKKA2RU49 373 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 FGF10O15520 208 aaPredicted RBP14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 ACSL4O60488 711 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 APEX1P27695 318 aaKnown RBP14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 HOXC8P31273 242 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 ALDH9A1P49189 494 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 CLCN7P51798 805 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 BTN1A1Q13410 526 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 DDI2Q5TDH0 399 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 EEF1AKMT1Q8WVE0 214 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 SCPEP1Q9HB40 452 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 RLIMQ9NVW2 624 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 SH3BP4Q9P0V3 963 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 UXTQ9UBK9 157 aaPredicted RBP14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 PADI3Q9ULW8 664 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 ING4Q9UNL4 249 aa14.1□□□□□ -0.15
VPS9D1-201ENST00000389386 E9PAM4 449 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 LYRM1O43325 122 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 KCNK5O95279 499 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 CLEC2LP0C7M8 214 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 PRKAR1AP10644 381 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 MAP2K6P52564 334 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 HNRNPA0Q13151 305 aaKnown RBP14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 GNA13Q14344 377 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 OVOS1Q6IE37 1185 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 HSDL2Q6YN16 418 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 SLC34A3Q8N130 599 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 SCAMP5Q8TAC9 235 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 EXOC2Q96KP1 924 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 SP110Q9HB58 689 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 FARSBQ9NSD9 589 aaKnown RBP14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 LOC285095A0A1B0GVY8 99 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 WWP2O00308 870 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 FZD6O60353 706 aa14.09□□□□□ -0.15
VPS9D1-201ENST00000389386 TP53P04637 393 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms