RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MPP7Q5T2T1 576 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 PGBD3Q8N328 593 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 C1orf52Q8N6N3 182 aaKnown RBP15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 SCAIQ8N9R8 606 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 GABARAPL3Q9BY60 117 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 CHST8Q9H2A9 424 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ACSL6Q9UKU0 697 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 E9PQ18 207 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 TNFRSF11BO00300 401 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ETFAP13804 333 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 JUPP14923 745 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 PTPN2P17706 415 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 SRSF11Q05519 484 aaKnown RBP15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 PPIGQ13427 754 aaKnown RBP eCLIP15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 C1QTNF12Q5T7M4 302 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 GPATCH2Q9NW75 528 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ZNF226Q9NYT6 803 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 COL4A6Q14031 1691 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ZNF106Q9H2Y7 1883 aaKnown RBP15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 SNPHO15079 494 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 TSPAN6O43657 245 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 GGT2P36268 569 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 RAE1P78406 368 aaKnown RBP15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ACSM2AQ08AH3 577 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ELP6Q0PNE2 266 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 RGNQ15493 299 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 ACSM2BQ68CK6 577 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 SLC46A3Q7Z3Q1 461 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 CELF2-AS1Q8N7Q2 184 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 EPYCQ99645 322 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 MMP27Q9H306 513 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 PRKAB1Q9Y478 270 aa15.62■□□□□ 0.09
NKX3-1-201ENST00000380871 C1orf226A1L170 272 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 ARHGEF15O94989 841 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 FGBP02675 491 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 CDK1P06493 297 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 CBSLP0DN79 551 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 CBSP35520 551 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 CRATP43155 626 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 POLR2LP62875 67 aaKnown RBP15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 DOC2AQ14183 400 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 TBCEQ15813 527 aaPredicted RBP15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 LRIT3Q3SXY7 679 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 ERICH5Q6P6B1 374 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 TMC5Q6UXY8 1006 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 AKAP14Q86UN6 197 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 CACTIN-AS1Q8N1I8 211 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 CBARPQ8N350 705 aaPredicted RBP15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 OR10G2Q8NGC3 310 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 OR8J2Q8NGG1 315 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 BADQ92934 168 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 SH3BP4Q9P0V3 963 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 SNX8Q9Y5X2 465 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 RANBP2P49792 3224 aaKnown RBP15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 CLCA1A8K7I4 914 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 FADS2P1A8MWK0 482 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 WASH3PC4AMC7 463 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 SPIBQ01892 262 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 ST3GAL4Q11206 333 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 BCL2A1Q16548 175 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 EXOC3L2Q2M3D2 409 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 FAM180BQ6P0A1 224 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 ZNF784Q8NCA9 323 aaPredicted RBP15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 OR5M11Q96RB7 305 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 MARCH7Q9H992 704 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 C14orf119Q9NWQ9 140 aa15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 MRPS23Q9Y3D9 190 aaKnown RBP15.61■□□□□ 0.09
NKX3-1-201ENST00000380871 A6NL46 340 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 SCAMP2O15127 329 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 MOSPD3O75425 235 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CTSLP07711 333 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 PDHA2P29803 388 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CSNK1DP48730 415 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 ZNF385BQ569K4 471 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 ARMCX4Q5H9R4 360 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 SFTPA1Q8IWL2 248 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 RAVER1Q8IY67 606 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 METTL4Q8N3J2 472 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 WDR20Q8TBZ3 569 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 GTPBP3Q969Y2 492 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CCM2Q9BSQ5 444 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 DOHHQ9BU89 302 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 FAM120CQ9NX05 1096 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 RHCGQ9UBD6 479 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 SPASTQ9UBP0 616 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 PCDHGB3Q9Y5G1 929 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 FAM227AF5H4B4 570 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 AGRPO00253 132 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 C8GP07360 202 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 TIMP2P16035 220 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 CEBPBP17676 345 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 ZNF284Q2VY69 593 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 C6orf183Q5T699 404 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 FAM9CQ8IZT9 166 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 MRPL43Q8N983 215 aaKnown RBP15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 OR5AK3PQ8NH89 298 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 AP2M1Q96CW1 435 aa15.6■□□□□ 0.09
NKX3-1-201ENST00000380871 ECHDC3Q96DC8 303 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms