RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 UCN3Q969E3 161 aa12.82□□□□□ -0.36
CCDC3-202ENST00000378839 ZNF566Q969W8 418 aa12.82□□□□□ -0.36
CCDC3-202ENST00000378839 ZNF717Q9BY31 904 aaPredicted RBP12.82□□□□□ -0.36
CCDC3-202ENST00000378839 MCOLN1Q9GZU1 580 aa12.82□□□□□ -0.36
CCDC3-202ENST00000378839 PRM3Q9NNZ6 103 aa12.82□□□□□ -0.36
CCDC3-202ENST00000378839 RBMX2Q9Y388 322 aaKnown RBP12.82□□□□□ -0.36
CCDC3-202ENST00000378839 CORINQ9Y5Q5 1042 aa12.82□□□□□ -0.36
CCDC3-202ENST00000378839 M0QX08 132 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 LZTS3O60299 673 aaPredicted RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ANGPTL1O95841 491 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 RECKO95980 971 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 PCGF2P35227 344 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 SLC35A2P78381 396 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 SLC5A12Q1EHB4 618 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 MFSD4BQ5TF39 518 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 TTC29Q8NA56 475 aaPredicted RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ASB16Q96NS5 453 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ALOXE3Q9BYJ1 711 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 BHLHE41Q9C0J9 482 aaPredicted RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 RASSF1Q9NS23 344 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 EDDM13A0A1B0GTR0 161 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 J3KTA2 159 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 RTCAO00442 366 aaKnown RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 PCDHGA12O60330 932 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 BCAS1O75363 584 aaPredicted RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 CCNA2P20248 432 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 PSMB5P28074 263 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 RRM2P31350 389 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 C2orf80Q0P641 193 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 CNTN1Q12860 1018 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ANGPTL8Q6UXH0 198 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 HORMAD1Q86X24 394 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 FAM129CQ86XR2 697 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 RBM12BQ8IXT5 1001 aaKnown RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 PARP8Q8N3A8 854 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 METTL4Q8N3J2 472 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ANKRD53Q8N9V6 530 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 OR8D1Q8WZ84 308 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 SLC35A5Q9BS91 424 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 MENTQ9BUN1 341 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 CCDC90BQ9GZT6 254 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 SLAMF7Q9NQ25 335 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 C1GALT1Q9NS00 363 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 CUEDC1Q9NWM3 386 aaPredicted RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 TAAR2Q9P1P5 351 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ZNF197O14709 1029 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 FUCA1P04066 466 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 IL3P08700 152 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 KEAP1Q14145 624 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ELAVL3Q14576 367 aaKnown RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 TMEM52BQ4KMG9 183 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ANXA8L1Q5VT79 327 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ERN2Q76MJ5 926 aaKnown RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 ZNF765Q7L2R6 523 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 RNF130Q86XS8 419 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 NFKBIDQ8NI38 313 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 THAP11Q96EK4 314 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 COX14Q96I36 57 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 DUSP21Q9H596 190 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 GPN2Q9H9Y4 310 aaPredicted RBP12.81□□□□□ -0.36
CCDC3-202ENST00000378839 TMEM9Q9P0T7 183 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 SLC6A14Q9UN76 642 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 DYRK1BQ9Y463 629 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 TESMINQ9Y4I5 508 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 MAP4K5Q9Y4K4 846 aa12.81□□□□□ -0.36
CCDC3-202ENST00000378839 SUV39H1O43463 412 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 CCDC159P0C7I6 412 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 JUNDP17535 347 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 ITIH1P19827 911 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 GSSP48637 474 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 BMXP51813 675 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 TAS2R38P59533 333 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 SELENOWP63302 87 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 RPP38P78345 283 aaKnown RBP12.8□□□□□ -0.36
CCDC3-202ENST00000378839 PPIGQ13427 754 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC3-202ENST00000378839 IL18R1Q13478 541 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 TUBA3CQ13748 450 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 MAD2L1BPQ15013 274 aaPredicted RBP12.8□□□□□ -0.36
CCDC3-202ENST00000378839 NPTX1Q15818 432 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 RFX4Q33E94 735 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC3-202ENST00000378839 DOHHQ9BU89 302 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 SLC6A16Q9GZN6 736 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 PRSS16Q9NQE7 514 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 DEC1Q9P2X7 70 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 BAG5Q9UL15 447 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 GMPPBQ9Y5P6 360 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 ALPK3Q96L96 1907 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 UGT2B11O75310 529 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 VIPP01282 170 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 PCSK2P16519 638 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 FCARP24071 287 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 KRT20P35900 424 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 MVKQ03426 396 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 PIP5KL1Q5T9C9 394 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 OR52J3Q8NH60 311 aa12.8□□□□□ -0.36
CCDC3-202ENST00000378839 FGF13Q92913 245 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms