RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SH3RF1Q7Z6J0 888 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 VTCN1Q7Z7D3 282 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 KLHL15Q96M94 604 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 CPEB1Q9BZB8 566 aaKnown RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 ICKQ9UPZ9 632 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 DLX2Q07687 328 aaPredicted RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 ARHGAP1Q07960 439 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 LENG8Q96PV6 779 aaPredicted RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 UHRF1Q96T88 793 aaPredicted RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 USP29Q9HBJ7 922 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 TPPPO94811 219 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 H1F0P07305 194 aaKnown RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 SFTPBP07988 381 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 LEPRP48357 1165 aaKnown RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 RALGPS1Q5JS13 557 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 KIAA0895LQ68EN5 471 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 OR5T1Q8NG75 326 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 ERMAPQ96PL5 475 aaPredicted RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 DTLQ9NZJ0 730 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 PDYNP01213 254 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 HERVK_113P63132 956 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 ZER1Q7Z7L7 766 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 FAM86B1Q8N7N1 296 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 DIO2Q92813 273 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 ERVK-6Q9BXR3 956 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 CCRL2O00421 344 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 FSCN2O14926 492 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 SHOXO15266 292 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 SOX2P48431 317 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 SLAMF1Q13291 335 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 FRG2Q64ET8 278 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 C15orf52Q6ZUT6 534 aaKnown RBP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 ZDHHC1Q8WTX9 485 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 AKAP1Q92667 903 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRIM13-202ENST00000378182 FRG2BQ96QU4 278 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 ITM2CQ9NQX7 267 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 PEAK1Q9H792 1746 aa13.64□□□□□ -0.23
TRIM13-202ENST00000378182 IFNGR1P15260 489 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 EPHA4P54764 986 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 TMIGD1Q6UXZ0 262 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 GPR137CQ8N3F9 429 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 CNEP1R1Q8N9A8 125 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 RBM15BQ8NDT2 890 aaKnown RBP13.63□□□□□ -0.23
TRIM13-202ENST00000378182 OR9K2Q8NGE7 335 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 ACTL8Q9H568 366 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 MYEF2Q9P2K5 600 aaKnown RBP13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PCDHB10Q9UN67 800 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PFKMP08237 780 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 TMEM107Q6UX40 140 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 SCGB1C1Q8TD33 95 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 SMPDL3AQ92484 453 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 FUBP3Q96I24 572 aaKnown RBP eCLIP13.63□□□□□ -0.23
TRIM13-202ENST00000378182 NAA11Q9BSU3 229 aaPredicted RBP13.63□□□□□ -0.23
TRIM13-202ENST00000378182 ATG5Q9H1Y0 275 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 FXYD6-FXYD2A0A087WZ82 144 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 ACTL6BO94805 426 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 SCELO95171 688 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 MAGEA3P43357 314 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 C3orf38Q5JPI3 329 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PGM2L1Q6PCE3 622 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 HACD2Q6Y1H2 254 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 ERN2Q76MJ5 926 aaKnown RBP13.63□□□□□ -0.23
TRIM13-202ENST00000378182 ZNF554Q86TJ5 538 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 P2RY8Q86VZ1 359 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 RPLP0P6Q8NHW5 317 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 FXYD6Q9H0Q3 95 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PCDHGB2Q9Y5G2 931 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 TRBC2A0A5B9 178 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 SOCS2O14508 198 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 KDELR3O43731 214 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 GABBR2O75899 941 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 OR1E2P47887 323 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 POU6F2P78424 691 aaPredicted RBP13.63□□□□□ -0.23
TRIM13-202ENST00000378182 TIGD4Q8IY51 512 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 SVOPLQ8N434 492 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 CCDC107Q8WV48 283 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 FAM3CQ92520 227 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PGAM5Q96HS1 289 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PITX2Q99697 317 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 RBM47A0AV96 593 aaKnown RBP13.63□□□□□ -0.23
TRIM13-202ENST00000378182 SLC9A3P48764 834 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 SMSP52788 366 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 TAS2R39P59534 338 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 BLMHQ13867 455 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 LRRC37A5PQ49AS3 106 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PGAM4Q8N0Y7 254 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 OR4K14Q8NGD5 310 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PCDH19Q8TAB3 1148 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 RAB8BQ92930 207 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 RBP7Q96R05 134 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PAPOLGQ9BWT3 736 aaKnown RBP13.63□□□□□ -0.23
TRIM13-202ENST00000378182 BEX2Q9BXY8 128 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 DNTTIP1Q9H147 329 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 PCDHAC1Q9H158 963 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 OR51I1Q9H343 314 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 BEX1Q9HBH7 125 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 DZANK1Q9NVP4 752 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 LTN1O94822 1766 aa13.63□□□□□ -0.23
TRIM13-202ENST00000378182 METTL21EPA6NDL7 271 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms