RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 C10orf107Q8IVU9 208 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 DTWD1Q8N5C7 304 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 CATSPER2Q96P56 530 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 FRG2BQ96QU4 278 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 CENPKQ9BS16 269 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 TRMOQ9BU70 441 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 SLC29A3Q9BZD2 475 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 ROGDIQ9GZN7 287 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 TRPC4Q9UBN4 977 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 SNX6Q9UNH7 406 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 PTRH2Q9Y3E5 179 aaKnown RBP12.55□□□□□ -0.4
CKAP2-202ENST00000378034 SGK494L7N484 410 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ESRRBO95718 433 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 IGHEP01854 428 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ENO1P06733 434 aaKnown RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ETV4P43268 484 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 TSFMP43897 325 aaKnown RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 CDC20Q12834 499 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 IFT88Q13099 833 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 DEFB134Q4QY38 66 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 AGBL2Q5U5Z8 902 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 TTC19Q6DKK2 380 aaPredicted RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ADNP2Q6IQ32 1131 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 LETMD1Q6P1Q0 360 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 PRSS41Q7RTY9 318 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 GPR155Q7Z3F1 870 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 STT3BQ8TCJ2 826 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 MIEF2Q96C03 454 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 TLCD1Q96CP7 247 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 CNDP1Q96KN2 507 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 IP6K3Q96PC2 410 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 SPSB2Q99619 263 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 TBCDQ9BTW9 1192 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 NPLQ9BXD5 320 aaPredicted RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 AICDAQ9GZX7 198 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ELOVL6Q9H5J4 265 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 PRM3Q9NNZ6 103 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 DMRT3Q9NQL9 472 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 CTSFQ9UBX1 484 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 AGPSO00116 658 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 PPP6CO00743 305 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 NKX2-8O15522 239 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ERI3O43414 337 aaKnown RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 CNOT3O75175 753 aaKnown RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 CYC1P08574 325 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ZGLP1P0C6A0 271 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 TSPAN8P19075 237 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ALDH3A1P30838 453 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 SLC18A1P54219 525 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 RAB8AP61006 207 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 RPS18P62269 152 aaKnown RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 SNRPNP63162 240 aaKnown RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ZNF33BQ06732 778 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 CUL3Q13618 768 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 DDX39BQ13838 428 aaKnown RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 COL28A1Q2UY09 1125 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 DEPDC1Q5TB30 811 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 KHDRBS2Q5VWX1 349 aaKnown RBP12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ABHD17CQ6PCB6 329 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 C19orf48Q6RUI8 117 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 RAB43Q86YS6 212 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 OR51Q1Q8NH59 317 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 THAP4Q8WY91 577 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 KCNC2Q96PR1 638 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 OR1F2PQ96R84 312 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 YIPF2Q9BWQ6 316 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 ZNF225Q9UK10 706 aa12.54□□□□□ -0.4
CKAP2-202ENST00000378034 PCDH17O14917 1159 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 BIRC5O15392 142 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 NPHS1O60500 1241 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 RDH16O75452 317 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 OR4F21O95013 312 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 TGFB1P01137 390 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 KRT6AP02538 564 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 KRT6BP04259 564 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 BPGMP07738 259 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 SERPINB5P36952 375 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 KRT6CP48668 564 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 COL9A2Q14055 689 aaPredicted RBP12.53□□□□□ -0.4
CKAP2-202ENST00000378034 ERV3-1Q14264 604 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 ADAMTS17Q8TE56 1095 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 AGAP11Q8TF27 550 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 QRFPRQ96P65 431 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 F2RL3Q96RI0 385 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 SERINC2Q96SA4 455 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 MTERF1Q99551 399 aaKnown RBP12.53□□□□□ -0.4
CKAP2-202ENST00000378034 SERPINI1Q99574 410 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 GATA5Q9BWX5 397 aaPredicted RBP12.53□□□□□ -0.4
CKAP2-202ENST00000378034 KCNK9Q9NPC2 374 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 SEMA3GQ9NS98 782 aa12.53□□□□□ -0.4
CKAP2-202ENST00000378034 A0A1B0GTL3 188 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 MAGEB17A8MXT2 336 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 BMP10O95393 424 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 ITGB2P05107 769 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 UMODP07911 640 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 HSD3B1P14060 373 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 HSD3B2P26439 372 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 MTTPP55157 894 aa12.52□□□□□ -0.4
CKAP2-202ENST00000378034 RPS13P62277 151 aaKnown RBP12.52□□□□□ -0.4
CKAP2-202ENST00000378034 BTN3A2P78410 334 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms