RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ARMC12Q5T9G4 340 aa15.86■□□□□ 0.13
TRIM39-201ENST00000376656 ZNF852Q6ZMS4 543 aa15.86■□□□□ 0.13
TRIM39-201ENST00000376656 SERINC5Q86VE9 423 aa15.86■□□□□ 0.13
TRIM39-201ENST00000376656 RDH10Q8IZV5 341 aa15.86■□□□□ 0.13
TRIM39-201ENST00000376656 CHTF18Q8WVB6 975 aa15.86■□□□□ 0.13
TRIM39-201ENST00000376656 ATG10Q9H0Y0 220 aa15.86■□□□□ 0.13
TRIM39-201ENST00000376656 ABCB9Q9NP78 766 aa15.86■□□□□ 0.13
TRIM39-201ENST00000376656 VWA8A3KMH1 1905 aa15.86■□□□□ 0.13
TRIM39-201ENST00000376656 GLYATL1P3A0A0U1RQE8 302 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 PRMT3O60678 531 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 CSF3P09919 207 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 CHMP24386 653 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 MAP2K5Q13163 448 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 EFR3AQ14156 821 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 GLYR1Q49A26 553 aaPredicted RBP15.85■□□□□ 0.13
TRIM39-201ENST00000376656 PAMR1Q6UXH9 720 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 VWA5B2Q8N398 1253 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 NECTIN4Q96NY8 510 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 HTATIP2Q9BUP3 242 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 SPATA9Q9BWV2 254 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 KCTD5Q9NXV2 234 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 FTSJ1Q9UET6 329 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 LSM2Q9Y333 95 aaKnown RBP15.85■□□□□ 0.13
TRIM39-201ENST00000376656 SH3D21A4FU49 640 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 SLC35F4A4IF30 521 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 ENTPD6O75354 484 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 CSO75390 466 aaKnown RBP15.85■□□□□ 0.13
TRIM39-201ENST00000376656 ZDHHC11BP0C7U3 371 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 SLC6A12P48065 614 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 RUNX1T1Q06455 604 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRIM39-201ENST00000376656 FAM110CQ1W6H9 321 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 SYCE2Q6PIF2 218 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 MIXL1Q9H2W2 232 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 GKN1Q9NS71 199 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 ACER3Q9NUN7 267 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 GPATCH2Q9NW75 528 aa15.85■□□□□ 0.13
TRIM39-201ENST00000376656 K7ERQ8 282 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 SCAMP2O15127 329 aaKnown RBP15.84■□□□□ 0.13
TRIM39-201ENST00000376656 VNN2O95498 520 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 ALPPP05187 535 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 C1SP09871 688 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 CD22P20273 847 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 GKP32189 559 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 C19orf57Q0VDD7 668 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 VEPH1Q14D04 833 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 LARS2Q15031 903 aaKnown RBP15.84■□□□□ 0.13
TRIM39-201ENST00000376656 KLHL17Q6TDP4 642 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 CCDC149Q6ZUS6 474 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 SLC44A2Q8IWA5 706 aaPredicted RBP15.84■□□□□ 0.13
TRIM39-201ENST00000376656 SLC34A3Q8N130 599 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 AQP11Q8NBQ7 271 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 FRMD6Q96NE9 622 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 VPS35Q96QK1 796 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 RHCGQ9UBD6 479 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 DNMT3LQ9UJW3 386 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 SLC45A1Q9Y2W3 748 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 ZAR1LA6NP61 321 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 ZNF670-ZNF695F2Z2N8 137 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 FAM227AF5H4B4 570 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 ATP5C1P36542 298 aaKnown RBP15.84■□□□□ 0.13
TRIM39-201ENST00000376656 KIR2DL3P43628 341 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 DGKKQ5KSL6 1271 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 CPTPQ5TA50 214 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 NPAS3Q8IXF0 933 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 NXPE1Q8N323 547 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 RNF121Q9H920 327 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 VPS29Q9UBQ0 182 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 A0A1B0GVM2 712 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 MTMR11A4FU01 709 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 GASTP01350 101 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 CLEC2LP0C7M8 214 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 SRCP12931 536 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 PTX3P26022 381 aaPredicted RBP15.84■□□□□ 0.13
TRIM39-201ENST00000376656 SSTR4P31391 388 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 HSPA14Q0VDF9 509 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 MRPL58Q14197 206 aaKnown RBP15.84■□□□□ 0.13
TRIM39-201ENST00000376656 TEAD4Q15561 434 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 MORN1Q5T089 497 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 SLC35F1Q5T1Q4 408 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 SIX5Q8N196 739 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 REPS1Q96D71 796 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 C11orf16Q9NQ32 467 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 TOR4AQ9NXH8 423 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 MBD1Q9UIS9 605 aaPredicted RBP15.84■□□□□ 0.13
TRIM39-201ENST00000376656 HCN4Q9Y3Q4 1203 aa15.84■□□□□ 0.13
TRIM39-201ENST00000376656 PCM1Q15154 2024 aa15.83■□□□□ 0.13
TRIM39-201ENST00000376656 ZNF780AO75290 641 aaPredicted RBP15.83■□□□□ 0.13
TRIM39-201ENST00000376656 CDRT1O95170 752 aa15.83■□□□□ 0.13
TRIM39-201ENST00000376656 IRF1P10914 325 aa15.83■□□□□ 0.13
TRIM39-201ENST00000376656 JUPP14923 745 aa15.83■□□□□ 0.13
TRIM39-201ENST00000376656 CBLP22681 906 aa15.83■□□□□ 0.13
TRIM39-201ENST00000376656 PSMA1P25786 263 aaKnown RBP15.83■□□□□ 0.13
TRIM39-201ENST00000376656 CORO1AP31146 461 aaKnown RBP15.83■□□□□ 0.13
TRIM39-201ENST00000376656 HNF1BP35680 557 aa15.83■□□□□ 0.13
TRIM39-201ENST00000376656 FEN1P39748 380 aaKnown RBP15.83■□□□□ 0.13
TRIM39-201ENST00000376656 MLLT3P42568 568 aaPredicted RBP15.83■□□□□ 0.13
TRIM39-201ENST00000376656 PRIM2P49643 509 aa15.83■□□□□ 0.13
TRIM39-201ENST00000376656 RHAGQ02094 409 aa15.83■□□□□ 0.13
TRIM39-201ENST00000376656 DUSP4Q13115 394 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms