RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SNX11Q9Y5W9 270 aa16.36■□□□□ 0.21
RXRB-201ENST00000374680 TRIOO75962 3097 aa16.36■□□□□ 0.21
RXRB-201ENST00000374680 C1orf226A1L170 272 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 PRAMEF25A6NGN4 478 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 PCDH17O14917 1159 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 WBP4O75554 376 aaKnown RBP16.35■□□□□ 0.21
RXRB-201ENST00000374680 AP2A2O94973 939 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 FUCA1P04066 466 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 LINC00271P0C7V0 271 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 TOP3AQ13472 1001 aaPredicted RBP16.35■□□□□ 0.21
RXRB-201ENST00000374680 SCARB2Q14108 478 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 EXOC3L2Q2M3D2 409 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 PRSS36Q5K4E3 855 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 KLHL17Q6TDP4 642 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 Q6ZNX1 250 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 DPPA4Q7L190 304 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 ADCK2Q7Z695 626 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 ADCK1Q86TW2 530 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 GALNT13Q8IUC8 556 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 ENTHD1Q8IYW4 607 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 TAMM41Q96BW9 452 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 MIEF1Q9NQG6 463 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 LOC100506127A0A0U1RQW1 187 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 TMEM247A6NEH6 219 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 TMEM229AB2RXF0 380 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 PPM1DO15297 605 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 SOD1P00441 154 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 C9P02748 559 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 CCDC159P0C7I6 412 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 ADH5P11766 374 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 CD300CQ08708 224 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 TUBA3CQ13748 450 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 C16orf78Q8WTQ4 265 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 F2RL3Q96RI0 385 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 DOHHQ9BU89 302 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 REEP4Q9H6H4 257 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 SLC23A2Q9UGH3 650 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 TLL1O43897 1013 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 C1GALT1C1LP0DN25 315 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 CD36P16671 472 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 CRISP3P54108 245 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 ZNF763Q0D2J5 394 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 ERICH5Q6P6B1 374 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 PAGE2Q7Z2X7 111 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 P2RY8Q86VZ1 359 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 PSD4Q8NDX1 1056 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 NUS1Q96E22 293 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 C11orf24Q96F05 449 aaPredicted RBP16.35■□□□□ 0.21
RXRB-201ENST00000374680 HHIPQ96QV1 700 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 GPN2Q9H9Y4 310 aaPredicted RBP16.35■□□□□ 0.21
RXRB-201ENST00000374680 GPR83Q9NYM4 423 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 TBC1D14Q9P2M4 693 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 TAC3Q9UHF0 121 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 RNF6Q9Y252 685 aa16.35■□□□□ 0.21
RXRB-201ENST00000374680 SPTBN5Q9NRC6 3674 aaKnown RBP16.34■□□□□ 0.21
RXRB-201ENST00000374680 PRAMEF33A0A0G2JMD5 474 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 ANKDD1BA6NHY2 528 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 TPST2O60704 377 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 PRAMEF10O60809 474 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 ALPPL2P10696 532 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 ITIH1P19827 911 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 ASMTP46597 345 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 PPIGQ13427 754 aaKnown RBP eCLIP16.34■□□□□ 0.215e-7■■□□□ 12.2
RXRB-201ENST00000374680 DNASE1L3Q13609 305 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 DCDC5Q6ZRR9 648 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 C11orf74Q86VG3 221 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 OR10G2Q8NGC3 310 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 OR9A1PQ8NGU1 263 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 DTD2Q96FN9 168 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 SH3YL1Q96HL8 342 aaPredicted RBP16.34■□□□□ 0.21
RXRB-201ENST00000374680 CFHR5Q9BXR6 569 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 SLC6A16Q9GZN6 736 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 MIR1-1HGQ9H1L0 117 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 CUEDC1Q9NWM3 386 aaPredicted RBP16.34■□□□□ 0.21
RXRB-201ENST00000374680 MOSPD1Q9UJG1 213 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 NDRG4Q9ULP0 352 aaKnown RBP16.34■□□□□ 0.21
RXRB-201ENST00000374680 PCDHGA6Q9Y5G7 932 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 A0A1W2PRB8 838 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 SPINT1O43278 529 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 NME6O75414 186 aaPredicted RBP16.34■□□□□ 0.21
RXRB-201ENST00000374680 PCCBP05166 539 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 ITGAMP11215 1152 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 ST13P50502 369 aaKnown RBP16.34■□□□□ 0.21
RXRB-201ENST00000374680 HSPB3Q12988 150 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 TP53BP2Q13625 1128 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 IQCCQ4KMZ1 466 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 LGI4Q8N135 537 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 CLIP4Q8N3C7 705 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 COPS4Q9BT78 406 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 LGR4Q9BXB1 951 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 ACOT13Q9NPJ3 140 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 DMRT3Q9NQL9 472 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 CTPS2Q9NRF8 586 aa16.34■□□□□ 0.21
RXRB-201ENST00000374680 TBC1D3BA6NDS4 549 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 H7BY64 318 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 FEN1P39748 380 aaKnown RBP16.33■□□□□ 0.21
RXRB-201ENST00000374680 SELENOWP63302 87 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 CARTPTQ16568 116 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 HIST2H2ACQ16777 129 aaPredicted RBP16.33■□□□□ 0.21
RXRB-201ENST00000374680 LEXMQ3ZCV2 418 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms