RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 SPRED2Q7Z698 418 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 P3H2Q8IVL5 708 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 LGALS12Q96DT0 336 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 HRASLS5Q96KN8 279 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 PITX2Q99697 317 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 NEURL2Q9BR09 285 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 COPS4Q9BT78 406 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 GPBP1L1Q9HC44 474 aaPredicted RBP14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 HMG20AQ9NP66 347 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 PALMDQ9NP74 551 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 GPR83Q9NYM4 423 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 SPASTQ9UBP0 616 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 PTPRSQ13332 1948 aa14.94□□□□□ -0.02
TMEM50A-201ENST00000374358 LTBP2Q14767 1821 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 PIPSLA2A3N6 862 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 SPINT1O43278 529 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 ADH1AP07327 375 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 RHOP08100 348 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 SOAT1P35610 550 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 HNRNPFP52597 415 aaKnown RBP14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 C21orf58P58505 322 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 PRSS48Q7RTY5 328 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 CPA6Q8N4T0 437 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 OR10G2Q8NGC3 310 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 UTP15Q8TED0 518 aaKnown RBP14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 LRRC3BQ96PB8 259 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 EPYCQ99645 322 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 PADI2Q9Y2J8 665 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 HSPE1-MOB4S4R3N1 261 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 ABHD14A-ACY1A0A1B0GW23 586 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 SOBPA7XYQ1 873 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 DNAJB5O75953 348 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 LINC00271P0C7V0 271 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 C2orf80Q0P641 193 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 SCARB2Q14108 478 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 TRMT11Q7Z4G4 463 aaKnown RBP14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 SFTPA1Q8IWL2 248 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 GTPBP3Q969Y2 492 aaKnown RBP14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 FOPNLQ96NB1 174 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 SIGLEC11Q96RL6 698 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 CFHR5Q9BXR6 569 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 SLIRPQ9GZT3 109 aaKnown RBP14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 REEP4Q9H6H4 257 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 NECTIN3Q9NQS3 549 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 CHCHD3Q9NX63 227 aaKnown RBP14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 PCDHGB3Q9Y5G1 929 aa14.93□□□□□ -0.02
TMEM50A-201ENST00000374358 PRAMEF33A0A0G2JMD5 474 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 KRBA1A5PL33 1030 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 PRAMEF10O60809 474 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 ADAM23O75077 832 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 TNFRSF21O75509 655 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 CDH3P22223 829 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 GRK5P34947 590 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 NFE2L1Q14494 772 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 DPPA4Q7L190 304 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 PAGE2Q7Z2X7 111 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 LGI4Q8N135 537 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 MAGEB10Q96LZ2 347 aaPredicted RBP14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 GABARAPL3Q9BY60 117 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 DMRT3Q9NQL9 472 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 C5AR2Q9P296 337 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 ZNF282Q9UDV7 671 aaPredicted RBP14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 MTCL1Q9Y4B5 1905 aaKnown RBP14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 EFCAB9A8MZ26 197 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 M0R082 166 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 RNASET2O00584 256 aaKnown RBP14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 PCDH17O14917 1159 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 ZSCAN9O15535 394 aaPredicted RBP14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 FURINP09958 794 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 HSD3B1P14060 373 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 HOXB6P17509 224 aaKnown RBP14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 HSD3B2P26439 372 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 PPM1AP35813 382 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 RXRGP48443 463 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 CD97P48960 835 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 KCNC4Q03721 635 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 ZNF77Q15935 545 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 ANXA8L1Q5VT79 327 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 CAMKMTQ7Z624 323 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.92□□□□□ -0.027e-10■■■■■ 94.2
TMEM50A-201ENST00000374358 TIFAQ96CG3 184 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 ABCG4Q9H172 646 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 ALPK3Q96L96 1907 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 CKAP5Q14008 2032 aa14.92□□□□□ -0.02
TMEM50A-201ENST00000374358 RTCAO00442 366 aaKnown RBP14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 GADD45AP24522 165 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 NNMTP40261 264 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 PRIM2P49643 509 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 OXA1LQ15070 435 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 DGUOKQ16854 277 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 RPS26P11Q5JNZ5 115 aaPredicted RBP14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 ZNF547Q8IVP9 402 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 SVOPQ8N4V2 548 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 C16orf78Q8WTQ4 265 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 PPCDCQ96CD2 204 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 B3GNT3Q9Y2A9 372 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 SNX8Q9Y5X2 465 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 CFAP20Q9Y6A4 193 aaKnown RBP14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 ATP6V1G1O75348 118 aa14.91□□□□□ -0.02
TMEM50A-201ENST00000374358 IL3P08700 152 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms