RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 NPY6RQ99463 290 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 RHDQ02161 417 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 RUNDC3AQ59EK9 446 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 SLC22A16Q86VW1 577 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 MFSD2AQ8NA29 543 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 FUZQ9BT04 418 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 YTHDF1Q9BYJ9 559 aaKnown RBP21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 IRF2BPLQ9H1B7 796 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 PSAT1Q9Y617 370 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 RNF13O43567 381 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 CLEC3AO75596 197 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 ARL6IP5O75915 188 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 MRPL3P09001 348 aaKnown RBP21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 ZNF16P17020 682 aaPredicted RBP21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 SH3D19Q5HYK7 790 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 OGFRL1Q5TC84 451 aaPredicted RBP21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 OR2L2Q8NH16 312 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 FANK1Q8TC84 345 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 PNPLA2Q96AD5 504 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 OR8D2Q9GZM6 311 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 ALG5Q9Y673 324 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 FAM163BP0C2L3 166 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 TMEM126BQ8IUX1 230 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 SCGB3A2Q96PL1 93 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 KCNH6Q9H252 994 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 XKR8Q9H6D3 395 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 RPF2Q9H7B2 306 aaKnown RBP21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 TM9SF3Q9HD45 589 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 CMAHPQ9Y471 501 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 PRSS51A0A1B0GVH4 220 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 KDM4FA0A1W2PPD8 638 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 A0A1W2PPL8 197 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 M0R2N6 131 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 PEX12O00623 359 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 INAVAQ3KP66 663 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 WDR45Q9Y484 360 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 H7BY64 318 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 J3QRK9 145 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 AHSA1O95433 338 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 HLA-DPB1P04440 258 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 ZNF267Q14586 743 aaPredicted RBP21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 C1orf189Q5VU69 101 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 NOXRED1Q6NXP6 359 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 TCEANCQ8N8B7 351 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 ZNF565Q8N9K5 539 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 MINDY2Q8NBR6 621 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 FBXL8Q96CD0 374 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 PRAP1Q96NZ9 151 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 ZNF860A6NHJ4 632 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 CDC123O75794 336 aaPredicted RBP21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 MVKQ03426 396 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 RMI1Q9H9A7 625 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 KLF11O14901 512 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 VNN2O95498 520 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 SLC6A6P31641 620 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 JPH3Q8WXH2 748 aaPredicted RBP21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 SIX4Q9UIU6 781 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 SERTAD3Q9UJW9 196 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 MYOCOSA0A1B0GUC4 107 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 GPR89AB7ZAQ6 455 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 SOX1O00570 391 aaPredicted RBP21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 GPR89BP0CG08 455 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 SNTA1Q13424 505 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 GATSQ8NAP1 163 aa21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 NOP16Q9Y3C1 178 aaKnown RBP21.4■■□□□ 1.02
TM9SF3-201ENST00000371142 SRCP12931 536 aa21.39■■□□□ 1.02
TM9SF3-201ENST00000371142 ZNF763Q0D2J5 394 aa21.39■■□□□ 1.02
TM9SF3-201ENST00000371142 PLEKHO2Q8TD55 490 aa21.39■■□□□ 1.02
TM9SF3-201ENST00000371142 C14orf166Q9Y224 244 aaKnown RBP21.39■■□□□ 1.02
TM9SF3-201ENST00000371142 HEXBP07686 556 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 ACADVLP49748 655 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 PDSS1Q5T2R2 415 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 KIAA1614Q5VZ46 1190 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 Q6ZVL8 140 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 OR8K3Q8NH51 312 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF461Q8TAF7 563 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 GNPDA2Q8TDQ7 276 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 DNAJA3Q96EY1 480 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 ADH1BP00325 375 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 LHCGRP22888 699 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC37A3Q8NCC5 494 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 SGIP1Q9BQI5 828 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 NLGN3Q9NZ94 848 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 RNF6Q9Y252 685 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 ETV3P41162 512 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 IRF5Q13568 498 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF517Q6ZMY9 492 aaPredicted RBP21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 TIFABQ6ZNK6 161 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 KCTD9Q7L273 389 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 THAP6Q8TBB0 222 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 SHKBP1Q8TBC3 707 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF471Q9BX82 626 aaPredicted RBP21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 ACTL8Q9H568 366 aa21.39■■□□□ 1.01
TM9SF3-201ENST00000371142 A0A1B0GVI7 797 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 LEFTY1O75610 366 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC15A1P46059 708 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC18A1P54219 525 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 TXNDC5Q8NBS9 432 aaKnown RBP21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 MAPK15Q8TD08 544 aa21.38■■□□□ 1.01
TM9SF3-201ENST00000371142 TESCQ96BS2 214 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms