RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 TMEM245Q9H330 911 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 RABL2BQ9UNT1 228 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 HCN4Q9Y3Q4 1203 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 MYL12BO14950 172 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 PDGFAP04085 211 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 PRKAR1AP10644 381 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 ACPPP15309 386 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 PRPS1L1P21108 318 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 KIAA1841Q6NSI8 718 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 AQP11Q8NBQ7 271 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 REPS1Q96D71 796 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 MGME1Q9BQP7 344 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 SLC29A3Q9BZD2 475 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 NDRG2Q9UN36 371 aaKnown RBP13.84□□□□□ -0.19
PHTF1-204ENST00000369604 PCDHB1Q9Y5F3 818 aa13.84□□□□□ -0.19
PHTF1-204ENST00000369604 PDPK1O15530 556 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 ANXA5P08758 320 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 HLA-EP13747 358 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 MYL12AP19105 171 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 GRK4P32298 578 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 ALDH6A1Q02252 535 aaKnown RBP13.83□□□□□ -0.2
PHTF1-204ENST00000369604 CACNG1Q06432 222 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 VEZF1Q14119 521 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 GLYR1Q49A26 553 aaPredicted RBP13.83□□□□□ -0.2
PHTF1-204ENST00000369604 IFI44LQ53G44 452 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 CCDC149Q6ZUS6 474 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 ABI3BPQ7Z7G0 1075 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 NAGSQ8N159 534 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 Q8N402 240 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 SLC37A3Q8NCC5 494 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 C11orf65Q8NCR3 313 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 MSANTD3Q96H12 275 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 WDFY2Q96P53 400 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 CNOT2Q9NZN8 540 aaKnown RBP13.83□□□□□ -0.2
PHTF1-204ENST00000369604 TMCC3Q9ULS5 477 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 POLHQ9Y253 713 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 WASHC1A8K0Z3 465 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 F5H5T6 163 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 F8W810 466 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 SHOXO15266 292 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 LAMP1P11279 417 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 HOXB9P17482 250 aaPredicted RBP13.83□□□□□ -0.2
PHTF1-204ENST00000369604 RPL9P32969 192 aaKnown RBP13.83□□□□□ -0.2
PHTF1-204ENST00000369604 CRYBB2P43320 205 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 SRSF11Q05519 484 aaKnown RBP13.83□□□□□ -0.2
PHTF1-204ENST00000369604 ABRQ12979 859 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 TNK1Q13470 666 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 ZNF792Q3KQV3 632 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 C19orf48Q6RUI8 117 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 PGBD3Q8N328 593 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 C1GALT1C1Q96EU7 318 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 CMTM7Q96FZ5 175 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 PSKH2Q96QS6 385 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 TAPBPLQ9BX59 468 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 P2RY12Q9H244 342 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 PPIL3Q9H2H8 161 aaKnown RBP13.83□□□□□ -0.2
PHTF1-204ENST00000369604 MIXL1Q9H2W2 232 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 ASB8Q9H765 288 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 GALNT9Q9HCQ5 603 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 PADI2Q9Y2J8 665 aa13.83□□□□□ -0.2
PHTF1-204ENST00000369604 IGLV3-10A0A075B6K4 115 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 CSO75390 466 aaKnown RBP13.82□□□□□ -0.2
PHTF1-204ENST00000369604 PSIP1O75475 530 aaKnown RBP13.82□□□□□ -0.2
PHTF1-204ENST00000369604 CD9P21926 228 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 CSTF2P33240 577 aaKnown RBP eCLIP13.82□□□□□ -0.2
PHTF1-204ENST00000369604 SELENOWP63302 87 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 UGT8Q16880 541 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 PRAMEF19Q5SWL8 479 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 ZNF57Q68EA5 555 aaPredicted RBP13.82□□□□□ -0.2
PHTF1-204ENST00000369604 TIGD3Q6B0B8 471 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 CCSAPQ6IQ19 270 aaPredicted RBP13.82□□□□□ -0.2
PHTF1-204ENST00000369604 SLC51BQ86UW2 128 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 ZBTB2Q8N680 514 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 KLHDC9Q8NEP7 349 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 PCNPQ8WW12 178 aaKnown RBP13.82□□□□□ -0.2
PHTF1-204ENST00000369604 KLHL6Q8WZ60 621 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 ANKRA2Q9H9E1 313 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 SH3BP4Q9P0V3 963 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 ST3GAL5Q9UNP4 418 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 PCDHB9Q9Y5E1 797 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 PCDHB11Q9Y5F2 797 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 ANKRD36A6QL64 1941 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 SH3D21A4FU49 640 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 H3BN98 237 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 TSPAN4O14817 238 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 PCDH7O60245 1069 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 PLOD3O60568 738 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 SOX14O95416 240 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 TRBC1P01850 177 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 RPIAP49247 311 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 CAV3P56539 151 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 CDH18Q13634 790 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 IL18Q14116 193 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.82□□□□□ -0.2
PHTF1-204ENST00000369604 ZNF284Q2VY69 593 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 GDPGP1Q6ZNW5 385 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 USP30Q70CQ3 517 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 SYNPOQ8N3V7 929 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 FBXL6Q8N531 539 aa13.82□□□□□ -0.2
PHTF1-204ENST00000369604 CREB3L4Q8TEY5 395 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms